| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0580 |
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| Symbol | pepF |
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| ID | 3242757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 574567 |
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| End bp | 576375 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637167245 |
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| Product | oligoendopeptidase F |
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| Protein accession | YP_188171 |
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| Protein GI | 57866543 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR00181] oligoendopeptidase F |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.970451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAC AATTAACAAG AGAAGAACAG GAACGTAAAT ATCCTGAATA TACATGGGAT
TTAACAACTA TATTTAAAAG CGATGAAGCA TTTGAAGAAG CTTTTAAAAG TATTGAAGCT
AAAATAGGTG AAGAAGAAAA ATTTAAAGGT CATCTTGGTG AAAGTGCCGA AACACTATAT
GAAGCGCTAA GTCTTGAAGA CGAGCTAGGT ACAAAATTAG AAAAGGTATA TGTATACGCA
CATTTAAAAC AAGATCAAGA TACTGCAAAT GATAAGTATA CCGGTTTAGA AGCACGTGCA
CATCAACTTG TTATTAAATA TAGCTCTGCA TGGAGTTTTT TAGTACCTGA AATTTTACAA
CTAGATGAAG CTACTATTCA ATCTTTTATC GATTCTAATG ATAATTTAAA ACGTTATGAA
TTCGATTTGA AATTGATTAA TGAGAAACGT CCACATATAT TAGATACGAA TACAGAAAAG
TTATTAACAG AAGCACAAGA CGCACTTTCT ACGCCTTCTA ATGTATATGG AATGTTTAGC
AATGCAGATT TAGAATTTGA AGATGCTATA GATAAAGATG GTCAAGCTTA TCCTTTAACA
CAAGGTACAT TTATCAAGTA TTTAGAGTCT GATGATCGTG AGTTAAGAGC TTCTGCATTT
AGAAATGTTT ATAAAGCATA CGGTGCGCAT AATAACACAC TAGGTGCTAC TTTAGCTGGT
GAGGTTAAGA AAAATGTATT TAATGCTAGA ACACATCATT ATCGTTCAGC ACGTGAAAGA
GCTTTAAGTA ATAACCATAT TCCAGAAGCT GTTTACGATA ACTTAATCAA AACGGTCCAT
AAATACTTAC CATTATTACA CAGATACACG AAGCTTAGAC AAGAGTTACT AGGTTTAGAC
GATTTAAAAA TGTATGATCT TTATACACCA CTTGTTAAAG ACGTTAAATT TGAAATGCCA
TATGAAGAGG CAAAATCTTG GATGTTAAAA GCACTTGAGC CAATGGGAGA AGAATACTTA
AACGTGGTTA AAGAAGGTCT AGATAACCGT TGGGTCGATG TATATGAAAA TAAAGGTAAA
CGTTCAGGCG GATATTCATC CGGTGGGCAT TTAACTAATC CTTTTATTTT ACTTAACTGG
TCTGACACTG TTTCTGATTT ATATACTTTA GTACATGAAT TTGGTCACTC TGCACATAGT
TACTTTAGTA GACAAAATCA ACCATCAAAT TTAAGCGATT ATACAATCTT TGTCGCTGAG
GTTGCATCAA CTTGTAATGA GGCTTTACTG AGTGACTACA TGGATAAACA TTTGGATGAT
GAACGACGTC TATTGTTACT TAACCAAGAA TTAGAACGAT TTAGAGCAAC ACTATTCCGT
CAAACCATGT TTGCTGAATT TGAACATAAA ATACATCAAA TAGAAGAAGC TGGGGAGCCA
TTAACGCCAA ATCGTATGAA TGAAGAATAT GCTAAACTTA ATAAATTGTA TTTCGGCGAA
GCGGTAGAAA CTGACGAAGA TATCAGTAAG GAATGGTCAC GTATTCCTCA TTTCTATATG
AATTATTATG TATATCAATA CGCTACTGGT TATAGTGCGG CGCAAAGTTT AAGTCATCAA
ATATTAACTG AGGGTCAACC TGCTGTTGAA CGTTATATCA ATGAATTCTT AAAAAAGGGT
AGCTCAAACT ATCCAATCGA AATATTAAAA AATGCAGGTG TTGACATGAC AACTCCTCAA
CCAATAGAGG AAGCTTGTGA AGTATTTGAG CAGAAATTAG ATGCTTTTGA AAAGTTAATG
AAAGCTTAG
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| Protein sequence | MSQQLTREEQ ERKYPEYTWD LTTIFKSDEA FEEAFKSIEA KIGEEEKFKG HLGESAETLY
EALSLEDELG TKLEKVYVYA HLKQDQDTAN DKYTGLEARA HQLVIKYSSA WSFLVPEILQ
LDEATIQSFI DSNDNLKRYE FDLKLINEKR PHILDTNTEK LLTEAQDALS TPSNVYGMFS
NADLEFEDAI DKDGQAYPLT QGTFIKYLES DDRELRASAF RNVYKAYGAH NNTLGATLAG
EVKKNVFNAR THHYRSARER ALSNNHIPEA VYDNLIKTVH KYLPLLHRYT KLRQELLGLD
DLKMYDLYTP LVKDVKFEMP YEEAKSWMLK ALEPMGEEYL NVVKEGLDNR WVDVYENKGK
RSGGYSSGGH LTNPFILLNW SDTVSDLYTL VHEFGHSAHS YFSRQNQPSN LSDYTIFVAE
VASTCNEALL SDYMDKHLDD ERRLLLLNQE LERFRATLFR QTMFAEFEHK IHQIEEAGEP
LTPNRMNEEY AKLNKLYFGE AVETDEDISK EWSRIPHFYM NYYVYQYATG YSAAQSLSHQ
ILTEGQPAVE RYINEFLKKG SSNYPIEILK NAGVDMTTPQ PIEEACEVFE QKLDAFEKLM
KA
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