| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0574 |
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| Symbol | oppA |
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| ID | 3241356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 567431 |
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| End bp | 569074 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637167239 |
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| Product | oligopeptide ABC transporter, oligopeptide-binding protein |
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| Protein accession | YP_188165 |
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| Protein GI | 57866530 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0985325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGTT TTAAAGTCTT AATTATTTTA TTAAGTGTAT GCATAATTTT ATCTGCTTGT
AGTAATAAGC AGAGTTTATA TTCAGACCAG GGGCAAGTTT TTAGGAAGGT AATCACACAA
GATATGACTA CACTAGATAC AGCTTTAATT ACAGATGCTG TTTCTGGTGA TATAGCAGCT
CAAGCTTTTG AAGGATTATA TACTTTAAAT AAAGAAGACA AAGCTGAACC AGCTATTGCT
AAATCTTTTC CAAAGAAAAG TAATGGTGGC AAAACACTTA CGATTAATTT AAGAAAAAAT
GCAAAATGGT CCAATGGAGA TTCGGTAACT GCATATGACT TCGTATATGC GTGGAGAAAG
GTAGTTAATC CTAAGACGGC TTCTGAGTTT GCATACATAA TGAGCGATAT AAAAAATGCA
GATGAAGTTA ATGCAGGTAA AAAATCAGTC AAGGATTTGG GTATCAAGGC TATAGGTAAA
TATAAATTAC AAGTAGATTT AGAAAGACCT GTACCTTATA TTAATGAACT ATTAGCACTT
AATACATTTA ATCCTCAAAA TGAGAAAGTT GCTAAAAAGT TTGGAGAACA ATATGGTACA
ACTGCTGAAA AAGCAGTGTA CAATGGACCA TTTGAAGTAA CAAATTGGAA AGTGGAAGAT
AAAATTCAAT TAGTTAAAAA TGAACAATAT TGGGATAAGA AGAATGTAAA ATTAGATAAA
GTGAACTATA AAGTATTAAA AGATCAACAA GCAGGTGCAT CGTTATATGA TACTGGCTCG
GTCGATGATA CTATTATAAC TTCTGAACAA GTTGATAAAT ATAGAGGAGA ATCTGCTTTG
AATTATCGTT TAACAGCAGC AACATTCTTT ATTAAAATGA ATCAAAAAAC AGTTCCTGAA
TTTAAAAATA AGCATTTAAG ATTGGCTATA TCTCAAGCAA TAAATAAAAA AGGGTATGTC
AATTCTGTTT TAAATGATGG TTCGCTACCA TCAAATAATT TTACTGGAGT AGGAACTGCC
GATACACCGG ATGGCAAAGA TTTTGCAAGA ACCATCAAAT CACCATTAAA ATTCAACCCT
GATTTAGCGA AAAAGAATTG GAGAGAAGCA CAAAAAGAAT TAGGAAAAAA TAAATTTACT
TTTACGATGA ACACACAGGA TACACCTGCT TCAAAAATTG CTGCAGAATA TATAAAATCC
CAAGTTGAGA AGAATTTACC AGGTGTGACA CTCAAAATTA AACAAATGCC ATTTAAACAA
AAAACTACTT TAGAATTAGC AAATAACTAT GAAGCAAGTT ATTCAGGTTG GAGTCCTGAT
TATCCTGATC CAACAGCATT TCTTCAAACA ATGACCAAAG ATAATGCACA GAATAATACA
GATTGGAGTA ATAAAGAATA CGATCAATTA CTCAAAGAAG CCAACAGCAA GCTTTTACGA
AAGCCAGGTG AACGTAATAC CTCATTACAA AAAGCGGAAT ATATCTTATT ACATGAAGCG
CCAGTCGCTC CTGTTTATCA AAAAGGAGAG GCACACTTAA CGAATCCGCA AGTAAAAGGA
TTACAATATC ACAAAGTAGG GCCTGAAACG ACGCTTAAAC ATGTCTATAT TGATAAATCA
ATCAATAGGG AGACAGGTAA ATAG
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| Protein sequence | MKGFKVLIIL LSVCIILSAC SNKQSLYSDQ GQVFRKVITQ DMTTLDTALI TDAVSGDIAA
QAFEGLYTLN KEDKAEPAIA KSFPKKSNGG KTLTINLRKN AKWSNGDSVT AYDFVYAWRK
VVNPKTASEF AYIMSDIKNA DEVNAGKKSV KDLGIKAIGK YKLQVDLERP VPYINELLAL
NTFNPQNEKV AKKFGEQYGT TAEKAVYNGP FEVTNWKVED KIQLVKNEQY WDKKNVKLDK
VNYKVLKDQQ AGASLYDTGS VDDTIITSEQ VDKYRGESAL NYRLTAATFF IKMNQKTVPE
FKNKHLRLAI SQAINKKGYV NSVLNDGSLP SNNFTGVGTA DTPDGKDFAR TIKSPLKFNP
DLAKKNWREA QKELGKNKFT FTMNTQDTPA SKIAAEYIKS QVEKNLPGVT LKIKQMPFKQ
KTTLELANNY EASYSGWSPD YPDPTAFLQT MTKDNAQNNT DWSNKEYDQL LKEANSKLLR
KPGERNTSLQ KAEYILLHEA PVAPVYQKGE AHLTNPQVKG LQYHKVGPET TLKHVYIDKS
INRETGK
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