| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0571 |
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| Symbol | oppC |
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| ID | 3241345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 564438 |
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| End bp | 565379 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637167236 |
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| Product | oligopeptide ABC transporter, permease protein |
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| Protein accession | YP_188162 |
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| Protein GI | 57866519 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCACGTC AAAGTAAGAA TTTTTGGCAA GATGCTTGGT CACAATTGAA ACGTAATAAA
TTAGCAGTAA TCGGAATGAT AGGTTTGTTG CTTATAGTTA TTATGGCATT TATAGGACCA
TTAATGAATA AACACGATTT TGCTGAGCAG AATGTTGATC ATCGTAATCT CCCAGCAAAA
ATACCATTAT TAGATCATGT TTCATTTTTA CCTTTTGACG GTAAAGGTAC GGACGGTAAA
AATGCTTACA AAGAAGCAGG TGCGAAAGAA AACTATTGGT TTGGTACTGA TCAACTTGGA
CGTGATTTAT GGACACGTAC TTGGAAAGGT GCTCAAATTT CACTTTATAT TGGTGTAGTT
GCTGCATTAT TAGATATTTG TATTGGCGTT GTATATGGAG CCGTTTCTGG TTTCTTTGGA
GGCAGGGTAG ATGATGTGAT GCAAAGGATT TTAGAAATTA TTGCTTCTAT ACCCAATTTA
ATTGTCGTTA TTTTATTCGT ACTTATTTTT GAACCATCAA TTTGGACTAT TATATTAGCT
ATGTCAATTA CTGGCTGGCT GGGGATGAGT AGAGTGGTAC GTGGAGAATT TTTAAAATTG
AAAAATCAAG AATTTGTTTT GGCATCTCAA ACATTGGGTG CTTCTAAATT CAAGTTAATC
TTTAAACATA TATTACCTAA CACATTAGGA GCAATTGTCG TTACATCAAT GTTTACTGTT
CCAAGTGCAA TATTTTTCGA AGCATTTTTA AGCTTTATTG GAATAGGGGT GCCTGCGCCT
AAGACGTCAT TAGGATCTCT TGTCAATGAT GGGCGTGCAA TGTTGTTGAT ACATCCTCAT
GAATTATTTA TTCCAGCAAT CATTTTAAGT TTATTGATTT TATTCTTCTA TCTATTTAGT
GATGGACTAC GTGATGCATT CGACCCAAAA ATGCGAAAAT AA
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| Protein sequence | MPRQSKNFWQ DAWSQLKRNK LAVIGMIGLL LIVIMAFIGP LMNKHDFAEQ NVDHRNLPAK
IPLLDHVSFL PFDGKGTDGK NAYKEAGAKE NYWFGTDQLG RDLWTRTWKG AQISLYIGVV
AALLDICIGV VYGAVSGFFG GRVDDVMQRI LEIIASIPNL IVVILFVLIF EPSIWTIILA
MSITGWLGMS RVVRGEFLKL KNQEFVLASQ TLGASKFKLI FKHILPNTLG AIVVTSMFTV
PSAIFFEAFL SFIGIGVPAP KTSLGSLVND GRAMLLIHPH ELFIPAIILS LLILFFYLFS
DGLRDAFDPK MRK
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