Gene SERP0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0556 
Symbol 
ID3242212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp546685 
End bp547590 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content34% 
IMG OID637167221 
Productfumarylacetoacetate hydrolase family protein 
Protein accessionYP_188147 
Protein GI57866489 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTC TATCATTCAA ACATAATGAC AGAACTTCAT ATGGTGTTAA AGTAAAACGT 
GAAGATGCTG TTTGGGATTT ACCAATGGTT TTTGCTGAGT TTGGGGACAA AGACTTTAAT
CCTAAAACTT TAATTGCAGG TTTACAGCAA AATCAAACTT TAGACTTTCA AGAGCAAGTT
CGAAAAGCAG TTGTCGCAGC AGAAGAAAGT GGAAGAGATG AGGAATTTAA ACTTTTATTC
ACTGATATTG ATTTTCTACC ACCAGTGACA CCTCCAAATA ATGTGATTGC ATTTGGTAGA
AATTATGAAG ATCATGCTAG TGAATTAAAT CATGAAGTTG ATAGTTTATA CGTATTTACT
AAAGCGGCTT CATCTTTAAC TGGTGATGAA GCAACAATTC CTAATCATAA AGATATTACA
GAACAATTGG ACTATGAAGG CGAACTTGGA ATTGTAATTG GAAAATCAGG CGAAAAGATT
CCTAGAGGAT TAGCTTTAGA TTATATTTAT GGATACACAA TTATCAATGA TATTACAGAT
CGTACTGCGC AAAGTTCACA TGATCAAGCA TTCTTATCAA AAAGTTTAAC TGGGGCATGT
CCAATGGGCC CTTATATAGT AACCAAAGAC GAATTACCTG CGCCAGAGAA TGTAAATATC
GTAACAAAAG TGAATAACGA AATTCGACAA GATGGCAACA CTGGTGAGAT GATTTTAAAA
ATAGATGAAC TCATCGAAAA GATTTCAAAA TATGTGGCTT TACATCCAGG CGATATCATT
GCAACTGGTA CACCCGCTGG TGTGGGTGCT GGTTTACAAC CACCACAATT TTTACAACCA
GGTGATGAAG TCAAAGTAAC TATAGATAAT ATTGGCACTT TAACAACATA TATATCTAAA
AATTAA
 
Protein sequence
MKFLSFKHND RTSYGVKVKR EDAVWDLPMV FAEFGDKDFN PKTLIAGLQQ NQTLDFQEQV 
RKAVVAAEES GRDEEFKLLF TDIDFLPPVT PPNNVIAFGR NYEDHASELN HEVDSLYVFT
KAASSLTGDE ATIPNHKDIT EQLDYEGELG IVIGKSGEKI PRGLALDYIY GYTIINDITD
RTAQSSHDQA FLSKSLTGAC PMGPYIVTKD ELPAPENVNI VTKVNNEIRQ DGNTGEMILK
IDELIEKISK YVALHPGDII ATGTPAGVGA GLQPPQFLQP GDEVKVTIDN IGTLTTYISK
N