| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0546 |
|---|
| Symbol | gluD |
|---|
| ID | 3240640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 530332 |
|---|
| End bp | 531576 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637167211 |
|---|
| Product | glutamate dehydrogenase, NAD-specific |
|---|
| Protein accession | YP_188137 |
|---|
| Protein GI | 57866471 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGA ATAATAATTT AGTAACTTCC ACTCAAGGGA TTATTAAAGA AGCATTACAC
AAGTTGGGCT TTGATGATGG TATGTATGAC CTTATAAAAG AACCAATTAG ATTTTTACAA
GTGCGCATTC CAGTACGAAT GGACGATGGG ACAGTTAAAA CATTTACTGG ATACCGTGCA
CAACATAATG ATGCAGTTGG CCCTACTAAA GGTGGCGTTC GTTTCCATCC AGAAGTTGAT
GAAGAAGAAG TGAAGGCATT ATCAATGTGG ATGACTTTAA AATGTGGCAT TGTTAATTTA
CCTTATGGTG GGGGTAAAGG CGGTATTGTT TGTGATCCAC GTCAAATGAG TATACACGAA
GTTGAGCGTC TATCTCGAGG GTATGTAAGA GCTATATCTC AATTTGTTGG GCCTAACAAA
GATATTCCAG CACCAGACGT TTTTACAAAC TCTCAAATTA TGGCTTGGAT GATGGATGAG
TATAGTGCAT TAGATAAATT TAATTCGCCA GGTTTTATAA CAGGCAAACC TATTGTATTA
GGTGGATCTC AAGGACGTGA TCGCTCTACA GCTTTAGGTG TAGTCATTGC AATTGAACAA
GCGGCAAAAC GTCGTGGCAT GGATATTAAA GATGCCAAAA TTGTGATTCA AGGTTTCGGC
AATGCAGGTA GTTTCTTAGC TAAATTCTTA TACGATTTAG GTGCTAAAGT AGTTGGTATA
AGTGATGCAT ATGGAGCCTT ACATGACCCT AATGGACTTG ATATAGATTA TTTATTAGAT
CGACGTGATA GCTTCGGTAC AGTTACAAAT CTATTCGAAG ATACAATTTC TAACAAAGAA
TTATTCGAAT TGGATTGTGA CATCCTTGTT CCTGCTGCAA TTTCCAATCA AATCACTGAA
GATAATGCGC ACGATATTAA AGCAAGCATT GTAGTTGAAG CTGCTAATGG CCCTACGACG
CCTGAAGCAA CACGTATTTT AACAGAAAGA GATATATTAC TAGTGCCGGA TGTACTTGCA
AGTGCAGGAG GTGTGACTGT ATCTTATTTC GAGTGGGTAC AAAATAATCA AGGTTATTAT
TGGACTGAAG AAGAAGTCAA TGACAAACTA CGTGAGAAGT TAGTAACAGC ATTTGATACG
ATTTATGAAT TGTCACAAAA TAGAAAAATT GATATGAGAT TAGCAGCATA TATAGTAGGT
ATTAAACGTA CTGCTGAAGC AGCAAGATAT AGAGGTTGGG CATAA
|
|---|
| Protein sequence | MTENNNLVTS TQGIIKEALH KLGFDDGMYD LIKEPIRFLQ VRIPVRMDDG TVKTFTGYRA
QHNDAVGPTK GGVRFHPEVD EEEVKALSMW MTLKCGIVNL PYGGGKGGIV CDPRQMSIHE
VERLSRGYVR AISQFVGPNK DIPAPDVFTN SQIMAWMMDE YSALDKFNSP GFITGKPIVL
GGSQGRDRST ALGVVIAIEQ AAKRRGMDIK DAKIVIQGFG NAGSFLAKFL YDLGAKVVGI
SDAYGALHDP NGLDIDYLLD RRDSFGTVTN LFEDTISNKE LFELDCDILV PAAISNQITE
DNAHDIKASI VVEAANGPTT PEATRILTER DILLVPDVLA SAGGVTVSYF EWVQNNQGYY
WTEEEVNDKL REKLVTAFDT IYELSQNRKI DMRLAAYIVG IKRTAEAARY RGWA
|
|---|
| |