Gene SERP0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0529 
Symbol 
ID3240648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp513929 
End bp515245 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content34% 
IMG OID637167195 
Producthypothetical protein 
Protein accessionYP_188121 
Protein GI57866479 
COG category[R] General function prediction only 
COG ID[COG2056] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0114104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAATG CTGTTGTAAT CGCAGTCATA TTAATGATCA TACTCTGTTT ATGTCGATTA 
AATGTGGTCA TTAGCTTATT TATTAGTGCA CTTGTCGGTG GATTAATATC AGGTATGAAT
TTAGAAAAAG TAATTAATGT TTTTGGAAAA AATATAGTAG ATGGCGCAGA AGTCGCATTA
AGTTATGCGT TACTCGGTGG TTTTGCTGCT TTGATTTCAT ATAGTGGTAT AACTGATTAT
CTTGTTGGTA AAATTATTGC AAGTATTCAT GCTGAAAATA GTAGACTTTC CCGAGTTAAG
GTTAAAATAA TTATTATCAT TGCATTGTTA GCAATGAGTA TCATGAGTCA AAACTTAATT
CCTGTACATA TTGCCTTTAT TCCAATTGTA ATACCTCCGC TTGTGAGTTT GTTTAACGAT
TTAAGAATTG ATCGCAGACT TATTGCTTTA GTAATAGGAT TTGGTTTGTG TTTTCCTTAC
GTGCTATTAC CTTATGGTTT CGGTCAAATT TTCCATCAAA TCATTCAAAG TGGTTTTCAA
AAAGCAAACC ATCCAATTGA GATGAACATG ATATGGAAGG CGATGTTAAT ACCTTCAATG
GGATATGTTG TGGGTCTCAT ACTTGGATTT ATTGTTTATA GAAAGCCACG CGTTTATGAA
CAACGTAATG TAAATGATCG AGAAACAATT TCGGAACTCA AACCTTATGT GCTAATTGTT
ACTGTCATTG CCATACTAGC TACGTTTTTA GTACAGACAT TTACAGATTC TATGATTTTT
GGTGCGTTAG CTGGGGTACT TGTTTTCTTT GTTTCAAGAG CTTATCGTTG GTATGAACTC
GATGAACAAT TTGTAGATGG AGTCAAATTA ATGGCTTATA TTGGTGTAGT GATACTAACA
GCTAACGGGT TTGCTGGCGT GATGAATGCA ACAGGTGATA TAGATAGCTT AGTCAAGAGT
TTAACAGGAT TAACTGGAGA TCATAAATTG ATTAGTATTA TCGTCATGTA CCTCATTGGA
CTTATTGTAA CATTAGGTAT TGGTTCCTCT TTTGCAACAA TACCTATTAT TGCTTCATTA
TTTATACCTT TTGGAGCATC AATTGGTTTA GACACAATGG CTCTTATTGC TTTAATTGGT
ACAGCAAGTG CTTTAGGTGA TTCAGGTTCT CCAGCAAGTG ATTCTACACT TGGACCGACA
GCCGGTTTGA ATATGGATGG ACAACATGAT CATATTCGTG ATACATGTAT CCCGAATTTC
TTATTTTATA ATGTTCCCCT TATGGTTTTT GGTACGATAG CAGCTATGGT ACTATAA
 
Protein sequence
MINAVVIAVI LMIILCLCRL NVVISLFISA LVGGLISGMN LEKVINVFGK NIVDGAEVAL 
SYALLGGFAA LISYSGITDY LVGKIIASIH AENSRLSRVK VKIIIIIALL AMSIMSQNLI
PVHIAFIPIV IPPLVSLFND LRIDRRLIAL VIGFGLCFPY VLLPYGFGQI FHQIIQSGFQ
KANHPIEMNM IWKAMLIPSM GYVVGLILGF IVYRKPRVYE QRNVNDRETI SELKPYVLIV
TVIAILATFL VQTFTDSMIF GALAGVLVFF VSRAYRWYEL DEQFVDGVKL MAYIGVVILT
ANGFAGVMNA TGDIDSLVKS LTGLTGDHKL ISIIVMYLIG LIVTLGIGSS FATIPIIASL
FIPFGASIGL DTMALIALIG TASALGDSGS PASDSTLGPT AGLNMDGQHD HIRDTCIPNF
LFYNVPLMVF GTIAAMVL