Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0527 |
Symbol | |
ID | 3240646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 510733 |
End bp | 511941 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637167193 |
Product | NADH dehydrogenase, putative |
Protein accession | YP_188119 |
Protein GI | 57866477 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000819916 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCAAG ATCGTAAGAA AGTGCTCGTA TTAGGTGCAG GTTATGCTGG TTTACAAACT GTAACTAAAT TGCAAAAGGA ACTTTCTGCT GATGCAGCGG AAATTACTTT AATTAATAAG AATGAATATC ATTATGAATC AACTTGGTTG CATGAAGCTT CTGCCGGTAC GATTAATTAT GAAGATTTAT TGTATCCTGT TGAGAAAACT GTCAACAAAG ATAAAGTGAA TTTTGTTGTT GCTGAGGTAA CAAAAATTGA TCGTAATGCT AAACGCGTAG AAACTGATAA GGGTGTTTAT GACTTTGATA TCTTAGTTGT TGCACTAGGT TTTGTTAGCG AAACATTTGG CATTGATGGT ATGAAAGAAC ATGCTTTCCA AATTGAGAAC GTTTTAACTT CTCGTAAGTT GTCTCGTCAC ATTGAAGATA AGTTCGCAAA TTATGCTGCT TCTAAAGAAA AAGATGATAA AGATTTATCT ATTTTAGTTG GGGGAGCTGG ATTTACAGGT ATTGAATTTC TAGGTGAATT AACTGATAGA ATTCCTGAAT TATGCAGTAA ATATGGTGTT GATCAAAGTA AAGTGAAGTT AACATGTGTT GAAGCAGCAC CTAAAATGTT ACCGATGTTC TCAGACGACT TAGTTAGTTA TGCAGTAAAA TATTTAGAAG ACCGTGGAGT AGAATTCAAA ATTGCAACAC CTATTGTCGC TTGTAATGAA AAAGGTTTCG TTGTTGAAGT CAATGGAGAA AAACAACAGT TAGAAGCTGG AACTTCTGTA TGGACTGCTG GAGTGCGTGG AAGTCATTTA ATGGAAGAAT CATTTGAAGG TGTTAAACGT GGACGCGTTA TCAATAAACA AGATTTAACA ATTGAAGGTC ATAATGACAT CTTCGTTATA GGAGATTGTT CAGCGTTTAT TCCAGCTGGT GAAGAGCGTC CATTACCAAC AACAGCTCAA ATTGCTATGC AACAAGGTGA GCATACTGCT AGCAACATTA AACGTTTATT AAATGGTGAA TCAACACAAG ATTTCCAATA TGTTAACCGT GGAACTGTAT GTTCATTAGG TGCTAATGAT GGTGTTGGAA TTGTATATGG TAGAGATATC GCTGGTAAAA AAGCAGCATT CTTGAAGAAA GTTATTGATA CTCGTGCGAT TTACAAACTT GGTGGCATAG GATTAGCCTT TAAAAAAGGG AAATTTTAA
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Protein sequence | MAQDRKKVLV LGAGYAGLQT VTKLQKELSA DAAEITLINK NEYHYESTWL HEASAGTINY EDLLYPVEKT VNKDKVNFVV AEVTKIDRNA KRVETDKGVY DFDILVVALG FVSETFGIDG MKEHAFQIEN VLTSRKLSRH IEDKFANYAA SKEKDDKDLS ILVGGAGFTG IEFLGELTDR IPELCSKYGV DQSKVKLTCV EAAPKMLPMF SDDLVSYAVK YLEDRGVEFK IATPIVACNE KGFVVEVNGE KQQLEAGTSV WTAGVRGSHL MEESFEGVKR GRVINKQDLT IEGHNDIFVI GDCSAFIPAG EERPLPTTAQ IAMQQGEHTA SNIKRLLNGE STQDFQYVNR GTVCSLGAND GVGIVYGRDI AGKKAAFLKK VIDTRAIYKL GGIGLAFKKG KF
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