| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0518 |
|---|
| Symbol | dltA |
|---|
| ID | 3242599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 503173 |
|---|
| End bp | 504630 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637167184 |
|---|
| Product | D-alanine--poly(phosphoribitol) ligase subunit 1 |
|---|
| Protein accession | YP_188110 |
|---|
| Protein GI | 57866461 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain
[TIGR01734] D-alanine--poly(phosphoribitol) ligase, subunit 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACT TAATTAATAT TCTAAACCAC TTTGTTCAGG AACAACCTGA AGCAGTTGCG
GTTAGACATA CAAATGATGA GCTAACATAT AAGCAACTTG ATGAAGAATC AAGTAAGTTA
GCACATCTAT TACAAGATAG TAAAAAGCCA ATGATTTTAT ATGGTCACAT GTCACCTTAC
ATGATTGTTG GTATGATTGG AGCGATTAAA TCCGGTTGCG GTTATGTTCC TATCGATACT
TCTGTTCCAA AAGAACGTGT CAATATGATT ATTGATAAAG TACAACCGGA AATCATTTTC
AATACTTCAG ATGAGACTTT GGAACAGACA AATGCACAAG TGCTTAAGGT TAGCGATATT
CAGGATTCAC AATATCCAAT TGTCTTTGAT AGTCAAATGA AGCAAAACGA TGTAGTATAT
ACAATTTTTA CTTCAGGGTC TACGGGAGAA CCTAAAGGTG TACAAATTGA ATATGCAAGT
TTAAATGAAT TCGCAGAATG GATGGTATCT TTAAATAAAA CTGGTACTGG TAAAGAATGG
TTAAATCAAG CGCCATTTTC GTTTGATTTA TCAGTAATGG CAATCTATCC TTGTTTAACA
TCAGGTGGTA CTTTAAATCT TGTTGATAAA GATATGATCA AAAAACCTAA ACTATTGAAC
GAAATGTTAG TTCAAACACC GATGAATGTT TGGGTTTCTA CGCCTTCTTT TATAGAAATG
TGTTTATTAT TACCTAATTT AAATGAACAA CAATATAATA GCTTAAAGCA ATTCTTTTTC
TGTGGGGAAA TTTTATCGCA TAAAACAGCT AAAGTCTTAG TTGAAAGATT TCCGAATTCA
ATGATTTATA ACACATATGG ACCAACTGAA GCTACTGTTG CAGTCACAAG TATACAAATC
ACAGAAGAAA TTTTAAATCA ATATAATCCT TTACCAGTTG GTGTGGCTAG ACCTGGTACA
AGATTATTTG CTACTGAAGA AGGAGAACTT GTCATTGAGG GGCAAAGCGT CAGTTTAGGT
TATTTAAAGA ATGAAGAAAA GACAGCCGCA GTATTTAATT TTGAAGACGG TGTTAGAACA
TATCATACTG GGGATAAAGC TAAAATTGAA GATGGATTGT GGTTTATTCA AGGACGTATT
GATTTCCAAA TTAAACTAAA TGGTTATCGT ATGGAACTAG AGGAAATTGA AACACAATTA
CGCCAGTCAA AACATGTAAG AGAGGCTGTT GTTGTGCCGG TTTATAAAAA TGGAAAGGTC
GTACATTTAA TAGGAGCAGT AGTACCTACT GAATCTGTAG AAGATAATTT AGCAATGACA
ACTCAAATTA AACACGAACT TAAATCACGC TTACCAGAAT ATATGATTCC TAGAAAGTTC
GAATGGATGG AACGACTACC ACTCACATTA AATGGTAAAT TAGATCGTAA GAAAATTGCC
GAGGTTGTAA ACGGATGA
|
|---|
| Protein sequence | MADLINILNH FVQEQPEAVA VRHTNDELTY KQLDEESSKL AHLLQDSKKP MILYGHMSPY
MIVGMIGAIK SGCGYVPIDT SVPKERVNMI IDKVQPEIIF NTSDETLEQT NAQVLKVSDI
QDSQYPIVFD SQMKQNDVVY TIFTSGSTGE PKGVQIEYAS LNEFAEWMVS LNKTGTGKEW
LNQAPFSFDL SVMAIYPCLT SGGTLNLVDK DMIKKPKLLN EMLVQTPMNV WVSTPSFIEM
CLLLPNLNEQ QYNSLKQFFF CGEILSHKTA KVLVERFPNS MIYNTYGPTE ATVAVTSIQI
TEEILNQYNP LPVGVARPGT RLFATEEGEL VIEGQSVSLG YLKNEEKTAA VFNFEDGVRT
YHTGDKAKIE DGLWFIQGRI DFQIKLNGYR MELEEIETQL RQSKHVREAV VVPVYKNGKV
VHLIGAVVPT ESVEDNLAMT TQIKHELKSR LPEYMIPRKF EWMERLPLTL NGKLDRKKIA
EVVNG
|
|---|
| |