Gene SERP0498 details

Gene Information

• Locus tag: SERP0498
• Symbol: sufS
• ID: 3240557
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 487782
• End bp: 489023
• Gene Length: 1242 bp
• Protein Length: 413 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637167164
• Product: cysteine desulfurase SufS
• Protein accession: YP_188090
• Protein GI: 57866419
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0520] Selenocysteine lyase
• TIGRFAM ID: [TIGR01979] cysteine desulfurases, SufS subfamily

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGAAC ATTCTTTTGA TGTCAAGGCA GTCATTAAAG ACTTTCCGAT ACTTGAGCAA 
AAGGTAAATA ATAAACGTTT AGCATACCTT GATTCAACTG CGACTAGCCA AACACCTGTA 
CAAGTTTTAA ATGTACTAGA TGATTACTAC AAACGCTATA ATTCTAATGT CCATCGTGGT 
GTACACACAT TAGGGTCTTT AGCTACAGAT GGCTATGAAA ATGCAAGAGA AACAGTAAGA 
CGTTTTATCA ATGCGAAGTA CTTTGAAGAA ATTATTTTCA CTCGAGGAAC AACTGCATCA 
ATAAATATAG TAGCACATAG TTATGGTGAC GCTAATATTA GTGAGGGTGA CGAAATTGTT 
GTAACAGAAA TGGAACATCA TGCTAATATT GTTCCATGGC AACAATTAGC TAAACGTAAA 
AATGCAACAC TAAAATTTAT TCCAATGACA AAAGATGGTG AATTGCAATT AGATGATATA 
AAAGCAACCA TCAATGATAA AACTAAAATT GTTGCTATCG CACACGTTTC CAATGTTTTA 
GGAACAATTA ATGATGTTAA AACTATCGCT AAAATTGCAC ATGAACATGG TGCAGTTATA 
AGTGTGGATG GTGCGCAATC AGCTCCACAC ATGGCTTTAG ATATGCAAGA TATCGATGCT 
GATTTTTATA GTTTTAGTGG ACATAAAATG TTAGGTCCTA CTGGCATTGG AGTTTTATAT 
GGAAAAAGAG AATTATTACA AAATATGGAA CCCGTTGAAT TTGGTGGAGA TATGATAGAC 
TTCGTAAGTA AATATGACGC CACTTGGGCT GACCTACCAA CTAAATTTGA GGCTGGCACA 
CCACTTATTG CTCAAGCAAT AGGTTTAGCA GAAGCTATAC ATTATATTGA AAATTTAGGT 
TTTAATGCGA TTCATCAGCA TGAAAAAGAA TTGACAGAAT ATGCATATGA ACAAATGTTA 
ACTATAGATG GTCTTGAAAT TTACGGTCCA CCAAAAGATA GACGTGCAGG GGTCATTACT 
TTTAATTTAG CAGATATACA TCCACATGAT GTAGCTACAG CTGTTGATAC AGAAGGTGTT 
GCAGTTCGTG CAGGCCATCA CTGTGCGCAA CCTTTGATGA AATGGTTAGG TGTCTCTTCA 
ACAGCACGTG CAAGTTTTTA CGTTTATAAT ACGAAAGAAG ATGTAGATCA ATTAGTTCAA 
GCATTGAAAC AAACGAAGGA GTTTTTCTCT TATGAATTTT AA 

 

Protein sequence

MAEHSFDVKA VIKDFPILEQ KVNNKRLAYL DSTATSQTPV QVLNVLDDYY KRYNSNVHRG 
VHTLGSLATD GYENARETVR RFINAKYFEE IIFTRGTTAS INIVAHSYGD ANISEGDEIV 
VTEMEHHANI VPWQQLAKRK NATLKFIPMT KDGELQLDDI KATINDKTKI VAIAHVSNVL 
GTINDVKTIA KIAHEHGAVI SVDGAQSAPH MALDMQDIDA DFYSFSGHKM LGPTGIGVLY 
GKRELLQNME PVEFGGDMID FVSKYDATWA DLPTKFEAGT PLIAQAIGLA EAIHYIENLG 
FNAIHQHEKE LTEYAYEQML TIDGLEIYGP PKDRRAGVIT FNLADIHPHD VATAVDTEGV 
AVRAGHHCAQ PLMKWLGVSS TARASFYVYN TKEDVDQLVQ ALKQTKEFFS YEF