Gene SERP0426 details

Gene Information

• Locus tag: SERP0426
• Symbol: uvrB
• ID: 3240773
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 427816
• End bp: 429801
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637167092
• Product: excinuclease ABC subunit B
• Protein accession: YP_188019
• Protein GI: 57866394
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0556] Helicase subunit of the DNA excision repair complex
• TIGRFAM ID: [TIGR00631] excinuclease ABC, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAGAAC ATGTTCCATT TAAGTTAAAG TCTGAATTTG AGCCACAAGG TGATCAGCCA 
CAAGCGATAC AAAAAATTGT GGATGGCGTA AATGAAGGGA AACGTCATCA AACCTTATTA 
GGTGCAACTG GGACAGGTAA AACTTTTACT ATGAGTAACG TAATTAAAGA GGTTGGTAAA 
CCTACACTTA TTATTGCACA TAACAAGACA TTAGCAGGTC AACTATATAG TGAATTTAAA 
GAATTTTTCC CAGAAAATAG AGTTGAATAT TTCGTTAGTT ATTACGACTA CTATCAACCT 
GAAGCATACG TGCCTTCAAC AGATACCTTT ATTGAAAAAG ACGCCTCCAT TAACGATGAA 
ATTGACCAAC TACGACATTC TGCTACAAGT TCTTTATTTG AACGTGATGA TGTCATTATT 
ATCGCAAGTG TTAGTTGTAT CTATGGTTTA GGTAATCCGG AAGAATATAA AAATTTGGTT 
GTTAGTGTAC GTGTTGGTAT GGAGATGGAA CGAAGCGAAT TGTTGAGAAA GTTAGTTGAT 
GTACAATACT CACGTAATGA CATAGATTTT CAACGTGGTA CATTTAGAGT GCGTGGAGAT 
GTTGTTGAAA TATTCCCAGC TTCTAGAGAA GAAATGTGTA TTCGCGTAGA ATTTTTTGGA 
GATGAAATTG ATCGTATCAG AGAGGTTAAC TATTTAACTG GTGAAGTAAT TCGAGAACGT 
GAACATTTTA CAATTTTCCC AGCTTCGCAC TTCGTTACTC GTGAAGAGAA AATGAAAGTA 
GCTATTGAAC GTATAGAAAA AGAATTAGAA GAGAGACTAA AAGAATTACG TGATGAGAAT 
AAATTATTAG AAGCTCAAAG GTTAGAACAA CGTACTAACT ATGATTTAGA AATGATGAGA 
GAAATGGGCT TTTGTTCAGG TATTGAAAAT TATTCTGTTC ACTTAACTTT AAGACCATTA 
GGTTCAACAC CATATACATT GCTTGATTAT TTTGGAGATG ATTGGCTTGT CATGATTGAT 
GAGTCTCACG TTACGTTACC TCAAATTCGT GGTATGTACA ATGGGGATAG AGCTCGTAAA 
CAAGTATTAA TAGACCATGG ATTTCGTTTG CCAAGTGCGT TGGATAACCG ACCATTAAAA 
TTTGAAGAAT TTGAAGAAAA AACAAAACAA CTTGTTTATG TTTCAGCTAC ACCAGGCCCA 
TATGAGTTAG AACATACAGA TGAAATGGTT GAACAAATTA TACGACCTAC TGGTTTACTT 
GATCCTAAAA TTGATGTGCG TCCAACTGAG AATCAAATCG ATGATCTTTT AAGTGAAATC 
CAAGATCGCG TTGACAAAGA TGAACGTGTA CTTGTGACAA CACTTACTAA AAAAATGAGT 
GAAGATTTAA CTACATATAT GAAAGAAGCG GGGATTAAAG TTAATTATTT ACACTCAGAA 
ATTAAAACAT TAGAACGAAT AGAAATTATT CGAGACTTAC GTATGGGTAC TTACGACGCA 
ATAGTTGGGA TCAATCTGCT GAGAGAGGGT ATAGATATAC CTGAAGTATC TTTAGTTGTA 
ATTTTAGATG CAGATAAGGA AGGCTTCTTA CGTTCTGATA GATCTCTTAT TCAAACTATT 
GGGCGAGCAG CACGTAATGA CAAAGGAGAA GTCATTATGT ATGCGGATAA AATTACAGAT 
TCTATGCAAT ATGCAATAGA TGAAACACAA AGACGTAGAG AAATACAAAT TGCTCATAAC 
AAAGAACATG GCATCACGCC GAAAACAATT AACAAAAAGA TTCACGACGT CATTAGTGCT 
ACTGTGGAGA GCGATGAGAC AAATCAACAA CAACAAACTG AATTACCTAA GAAAATGACA 
AAGAAAGAAC GTCAAAAAAC AATAGAAAAT ATAGAAAAAG AAATGAAAAA AGCAGCCAAA 
GATTTAGATT TCGAAAAAGC AACAGAGTTA AGAGATATGT TATTTGAATT AAAAGCAGAA 
GGGTGA 

 

Protein sequence

MVEHVPFKLK SEFEPQGDQP QAIQKIVDGV NEGKRHQTLL GATGTGKTFT MSNVIKEVGK 
PTLIIAHNKT LAGQLYSEFK EFFPENRVEY FVSYYDYYQP EAYVPSTDTF IEKDASINDE 
IDQLRHSATS SLFERDDVII IASVSCIYGL GNPEEYKNLV VSVRVGMEME RSELLRKLVD 
VQYSRNDIDF QRGTFRVRGD VVEIFPASRE EMCIRVEFFG DEIDRIREVN YLTGEVIRER 
EHFTIFPASH FVTREEKMKV AIERIEKELE ERLKELRDEN KLLEAQRLEQ RTNYDLEMMR 
EMGFCSGIEN YSVHLTLRPL GSTPYTLLDY FGDDWLVMID ESHVTLPQIR GMYNGDRARK 
QVLIDHGFRL PSALDNRPLK FEEFEEKTKQ LVYVSATPGP YELEHTDEMV EQIIRPTGLL 
DPKIDVRPTE NQIDDLLSEI QDRVDKDERV LVTTLTKKMS EDLTTYMKEA GIKVNYLHSE 
IKTLERIEII RDLRMGTYDA IVGINLLREG IDIPEVSLVV ILDADKEGFL RSDRSLIQTI 
GRAARNDKGE VIMYADKITD SMQYAIDETQ RRREIQIAHN KEHGITPKTI NKKIHDVISA 
TVESDETNQQ QQTELPKKMT KKERQKTIEN IEKEMKKAAK DLDFEKATEL RDMLFELKAE 
G