| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0422 |
|---|
| Symbol | |
|---|
| ID | 3240769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 425270 |
|---|
| End bp | 426070 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637167088 |
|---|
| Product | LysM domain-containing protein |
|---|
| Protein accession | YP_188015 |
|---|
| Protein GI | 57866390 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3942] Surface antigen |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CGCTAACTGT AACGTTAAGT TCGATTGCAG CTTTTATTGC AATCAACACT
GCAGCTAACG CACAAGAATC TGAGACGTCG CAACTAGACA CATATGCAAC GGGTGATGTA
ATTACAAATC AATCAAACTT AGGTATTTAC ATTGTAAAAC CTGGAGATAG TTTATATAAA
ATTGCTTTAG AACATAATCT TTCTTTAGAA GAGCTTTATG CATTAAATCC TGGTGTAGAA
CCTCTTATTT TTCCGGGAGA TGAAATTGTA GTATCTGAAA CTGCATTTGA ACAATTTAAT
AACACAAACA CATTCGTAAA TTATGAAACT AACTACATTC CAGTAGGATA TAATAATGTA
TCAACTGATA CATCCAACAC TACTTATGAT AATTATGATA GTGAATCAAC TGATACATAC
TCTGTGTCAA ACGCCTATGA TGGTCTAAGA AGTGTATCTA ACTCAGGTAA TTTATACACT
ACTGGTCAAT GTACTTATTA TGCATTCGAT CGTCGAGCTG AGCTAGGGAA ACCAATTGGA
AGTCTATGGG GCAACGCTAG TAACTGGGCA TATTCAGCTA ATCAGGCTGG CTTTAATGTA
GATCACACAC CTGAGGTTGG TGCTGTATTC CAAAGTGGTC CGGGTCAAAA TGGGGCTGGT
GCTTATGGAC ATGTTGGCGT TGTTGAATCA ATCAATTCTA ATGGTTCTGT AACTGTTTCG
GAAATGAACT GGAATGGTGG CGTTAACGTA AAATCTTACA GAACTATTAG CAACCCTAAT
TCATATAATT ACATTCACTA A
|
|---|
| Protein sequence | MKKTLTVTLS SIAAFIAINT AANAQESETS QLDTYATGDV ITNQSNLGIY IVKPGDSLYK
IALEHNLSLE ELYALNPGVE PLIFPGDEIV VSETAFEQFN NTNTFVNYET NYIPVGYNNV
STDTSNTTYD NYDSESTDTY SVSNAYDGLR SVSNSGNLYT TGQCTYYAFD RRAELGKPIG
SLWGNASNWA YSANQAGFNV DHTPEVGAVF QSGPGQNGAG AYGHVGVVES INSNGSVTVS
EMNWNGGVNV KSYRTISNPN SYNYIH
|
|---|
| |