Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0403 |
Symbol | |
ID | 3242516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 404708 |
End bp | 405751 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637167069 |
Product | transferrin receptor |
Protein accession | YP_187996 |
Protein GI | 57866346 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4607] ABC-type enterochelin transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.400692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CAGTCTTATT TTTATTATTG TCTCTAGTTT TAGTTTTAAC GGCTTGTAGT AATAGTTCGA ATAATAATTC AACTTCGAAA AAGAAAAATA GTGATTCTAA AGAAACTGTA ACCATCAAAA ATAGTTTTGA AGCAAGTGGT AAAGAAAATA ATGGCAGTGA TAAGAAAAAA ATCTCTAATA CTGTCGAAGT ACCAAAGAAT CCTAAAAATG CCGTTGTATT AGATTATGGA GCGCTTGATG TGTTGAAAGA ATTAGGTGTG GCTGATAAAG TAAAAGGTTT ACCTAAAGGT GAAAATAACC AATCTTTACC TAAATTTTTA GATGAATTTA AAGATGATAA GTATATTAAT ACTGGAAATT TAAAAGAAGT GAACTTTGAT AAAGTTGCAT CAGCTAAACC AGATGTGATT TTTATTTCAG GAAGAACAGC TAATCAGAAA AATTTAGATG AATTTAAAAA AGCTGCACCA AAAGCTAAAG TTGTATATGT AGGTACAAGT GATGACAACT TAATTAAAGA TATGAAAAAA AATACAGAAA ATTTAGGGAA AATCTACGAT AAAGAAGATA AAGCTAAAAA AATTAATAAA GATTTAGATA GAAAAATATC TGATATGAAA GATAAAACTA AAGACTTTAA TAAGAAAGTA ATGTATTTAT TGGTTAACGA AGGTGAACTA TCAACGTTTG GACCAGGAGG AAGATTTGGT GGTTTAGTGT TTGATACATT AGGATTTAAA CCTGCAGACA AAAAGGTTAG CAAAAGCCCG CATGGTCAAA ATATAAATAA TGAATATATT AACAAGCAGA ATCCAGATGT TATTTTAGCT ATGGATCGTG GTTCAGTTGT AGGTGGTAAA GCAACAACAA ATCAAGTTTT AAAAAACAAA GTTATAAAAA ATGTAAAAGC AGTAAAAAGT AATCATATTT ACGAATTAGA TCCAAAACTA TGGTATTTCT CTTCAGGATC TTCAACGACA ACTATCAAAC AAATTGATGA ATTAAATGAA GTAGTAGAGA AAGTTGAAAA ATAA
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Protein sequence | MKKTVLFLLL SLVLVLTACS NSSNNNSTSK KKNSDSKETV TIKNSFEASG KENNGSDKKK ISNTVEVPKN PKNAVVLDYG ALDVLKELGV ADKVKGLPKG ENNQSLPKFL DEFKDDKYIN TGNLKEVNFD KVASAKPDVI FISGRTANQK NLDEFKKAAP KAKVVYVGTS DDNLIKDMKK NTENLGKIYD KEDKAKKINK DLDRKISDMK DKTKDFNKKV MYLLVNEGEL STFGPGGRFG GLVFDTLGFK PADKKVSKSP HGQNINNEYI NKQNPDVILA MDRGSVVGGK ATTNQVLKNK VIKNVKAVKS NHIYELDPKL WYFSSGSSTT TIKQIDELNE VVEKVEK
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