| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0341 |
|---|
| Symbol | |
|---|
| ID | 3240661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 342960 |
|---|
| End bp | 344654 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637167010 |
|---|
| Product | ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_187937 |
|---|
| Protein GI | 57866273 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAC ATATTCATTT TAGTATAGAT AGAGATTTAA TATGCGCTAT CATGGTAGGT
GTTTTAAGCG GAATTGTAAC ATTAGCAATG TTCTTTTTAA GTGGTTATAT GATTACTCAA
AGTGCGCTAG GTGCGCCACT TTATGCATTA ATGATTTTAG TTGTATCTGT TAAATTGTTT
GGTTTTTTAA GAGCAATTAC ACGCTATATA GAAAGATTAC TTTCACACAA GACGACATTT
ACAATGTTAC GTAATGTACG AGTTCAATTT TTAAAAATGC TATATCCAGT CGTTCCAGAT
ATCTATAGAA GATTTAATTC AAGTGATCTT ATTACAAAAA TGATAAGCCG TGTAGAAGCT
TTACAAAACA TATATCTGAG AGTATATTAC CCACCGATTG TAATCGGATT AACTGCAATT
GTTTCAGTAA TAACTATGTT GTTTTTATCT CCACTACATG CATTAGTGAT TACTTTAAGT
ATGTTATTAA CTTTATGGAT TGTTCCTTGG TTAAGTGCTA TGAAAGCACG TAAATTAAAG
CAACAAGTGA CCCAAACGCA AAAAACATTT CTTAAAAGAT ATTATGATTA TAAAGAAGGT
CATGAAGAAT TAAAACGTTT CAATCGCAGC GATGACTTCG AAAATACAGT TTCCCAGTCT
TTACGACAAT TTGATGATAT GCAACTTAAG GAACGCCGAT TTCTTTCTAT TTATGACTAC
TTGTTAAACT TAATAGCGAT GTTCTCAATA TTTATGTGTT TAGTGTTAGG TGCGCAACAG
ATTCATGATG GTCAGCTCAA TGCTATTTAT ATTACAAGTA TTATATTGAT GATATTAACT
TTATTTGAAC AAGCAGTACC TATGAGCAAT GTGGCATATT ATAAAGCAGA TACAGACCTG
GCACTTGAAG AGATACAAGA GGTTATTGTA CCTAAGTATA AAATTCCTTC AGAACATACA
AACTTAAAGC GTTCGCAAAA TCTTTTATTA GAAATTAAAA ATGTCACATT TAAATATGAA
CATCAACATC ATTCTACTTT AAAACAGATT AATCTAACCA TTGAATATGG TGATAAGGTG
GCAATCATTG GTCCTTCAGG ATCAGGTAAA AGTACTTTGC TTCATGTATT ACTTGGGCTA
TATCAAATAG AAGAGGGAGA AGTGAGATTA AATGGTAAGG ATATGAACAG TATCAATGAC
AATGATAAAT ATCAAACATT TAATGCAATG CTTCAATCTC AATATATTTT TGATGGTTCA
ATTCGTGATA ATTTATTTTC TGAGCAATCA GATGATAACC TCAAAAAGGT TCTCGAAGAT
GTTGGATTAG AATATTTAAA TTTAGATAGT ATAGTTACGT TAGACGGTCA TAATTTATCA
GGTGGGGAAG CTCAACGTCT AAGTTTAGCG AGATTGCTAT TAAGACCTTC GGCCGGTTTT
TGGATATTAG ATGAACCTAC TACAGCACTA GATATTAATA ATACCCAAAA AATTATAAAT
TTGATTGAAT CCTTATCCCA AACACTCATC ATAGCTACAC ATGATTTAGA AATACTTCCA
AGATTTAATA AAATTATAGT CATGAATGAC GGAGAAATAA TAGAAAATGA TTCATATCAA
GAATTAATGC AGCATGACGG TTATTTAAAA AAAGTAATAG AAATGAATGG AAACGAAATG
AAATTTTTTA ATTAA
|
|---|
| Protein sequence | MKSHIHFSID RDLICAIMVG VLSGIVTLAM FFLSGYMITQ SALGAPLYAL MILVVSVKLF
GFLRAITRYI ERLLSHKTTF TMLRNVRVQF LKMLYPVVPD IYRRFNSSDL ITKMISRVEA
LQNIYLRVYY PPIVIGLTAI VSVITMLFLS PLHALVITLS MLLTLWIVPW LSAMKARKLK
QQVTQTQKTF LKRYYDYKEG HEELKRFNRS DDFENTVSQS LRQFDDMQLK ERRFLSIYDY
LLNLIAMFSI FMCLVLGAQQ IHDGQLNAIY ITSIILMILT LFEQAVPMSN VAYYKADTDL
ALEEIQEVIV PKYKIPSEHT NLKRSQNLLL EIKNVTFKYE HQHHSTLKQI NLTIEYGDKV
AIIGPSGSGK STLLHVLLGL YQIEEGEVRL NGKDMNSIND NDKYQTFNAM LQSQYIFDGS
IRDNLFSEQS DDNLKKVLED VGLEYLNLDS IVTLDGHNLS GGEAQRLSLA RLLLRPSAGF
WILDEPTTAL DINNTQKIIN LIESLSQTLI IATHDLEILP RFNKIIVMND GEIIENDSYQ
ELMQHDGYLK KVIEMNGNEM KFFN
|
|---|
| |