Gene SERP0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0314 
Symbol 
ID3241794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp317337 
End bp318098 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content32% 
IMG OID637166983 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_187910 
Protein GI57866223 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.924183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCGATAT TAGAGGTAAG ACAGTTGTCA AAAGTCTATG GTGATAAGCA AGCTTTCCAA 
GAAGTTTTGA AAGAAATTAA TTTAGATGTT GATGAAGGTG AGTTTATATC AATTATGGGA
CCTTCTGGTT CAGGAAAGAC AACTTTATTA AATGTACTTA GTTCGATTGA TTATATGACT
AAAGGATCTA TTACAATCAA CGGGAAACAA CTTGAGAAGT TATCTAATAA GCAATTATCT
GATATTAGAA AAAAAGATAT TGGATTTATT TTTCAAGATT ATAATATTTT AAATACCTTA
ACCGTTAAAG AAAATATCAT GCTTCCACTA TCAGTTCAAA AGTTAGATAA ACAAATAATG
CATGAACGTT ATCAACGTAT AGTAGAAGCT TTGAACATTA GTGATATTAG TGATAAATAT
CCATCAGAGT TGTCAGGTGG ACAGCGTCAA CGTACCTCAG CAGCAAGGGC ATTTATTAAT
TTACCTTCAA TTATATTTGC TGATGAGCCT ACAGGTGCTT TAGATTCTAA AAGTACACTA
GATTTACTTA AGCGTCTTAA ATATATGAAT GAGGAATTTA ACACAACCAT ACTTATGGTG
ACACATGATC CAGTAGCGGC TAGTTTTTCA AACCGTGTTG TGATGTTAAA GGATGGACAA
ATCTTTACTG AGTTGTATCA AGGTGATGAT GATAAACAAA CGTTTTATAA AGAAATTATA
AGAACGCAAA GTGTACTTGG TGGCATCAAT TATGAGCTTT AA
 
Protein sequence
MSILEVRQLS KVYGDKQAFQ EVLKEINLDV DEGEFISIMG PSGSGKTTLL NVLSSIDYMT 
KGSITINGKQ LEKLSNKQLS DIRKKDIGFI FQDYNILNTL TVKENIMLPL SVQKLDKQIM
HERYQRIVEA LNISDISDKY PSELSGGQRQ RTSAARAFIN LPSIIFADEP TGALDSKSTL
DLLKRLKYMN EEFNTTILMV THDPVAASFS NRVVMLKDGQ IFTELYQGDD DKQTFYKEII
RTQSVLGGIN YEL