Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0314 |
Symbol | |
ID | 3241794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 317337 |
End bp | 318098 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637166983 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_187910 |
Protein GI | 57866223 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.924183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCGATAT TAGAGGTAAG ACAGTTGTCA AAAGTCTATG GTGATAAGCA AGCTTTCCAA GAAGTTTTGA AAGAAATTAA TTTAGATGTT GATGAAGGTG AGTTTATATC AATTATGGGA CCTTCTGGTT CAGGAAAGAC AACTTTATTA AATGTACTTA GTTCGATTGA TTATATGACT AAAGGATCTA TTACAATCAA CGGGAAACAA CTTGAGAAGT TATCTAATAA GCAATTATCT GATATTAGAA AAAAAGATAT TGGATTTATT TTTCAAGATT ATAATATTTT AAATACCTTA ACCGTTAAAG AAAATATCAT GCTTCCACTA TCAGTTCAAA AGTTAGATAA ACAAATAATG CATGAACGTT ATCAACGTAT AGTAGAAGCT TTGAACATTA GTGATATTAG TGATAAATAT CCATCAGAGT TGTCAGGTGG ACAGCGTCAA CGTACCTCAG CAGCAAGGGC ATTTATTAAT TTACCTTCAA TTATATTTGC TGATGAGCCT ACAGGTGCTT TAGATTCTAA AAGTACACTA GATTTACTTA AGCGTCTTAA ATATATGAAT GAGGAATTTA ACACAACCAT ACTTATGGTG ACACATGATC CAGTAGCGGC TAGTTTTTCA AACCGTGTTG TGATGTTAAA GGATGGACAA ATCTTTACTG AGTTGTATCA AGGTGATGAT GATAAACAAA CGTTTTATAA AGAAATTATA AGAACGCAAA GTGTACTTGG TGGCATCAAT TATGAGCTTT AA
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Protein sequence | MSILEVRQLS KVYGDKQAFQ EVLKEINLDV DEGEFISIMG PSGSGKTTLL NVLSSIDYMT KGSITINGKQ LEKLSNKQLS DIRKKDIGFI FQDYNILNTL TVKENIMLPL SVQKLDKQIM HERYQRIVEA LNISDISDKY PSELSGGQRQ RTSAARAFIN LPSIIFADEP TGALDSKSTL DLLKRLKYMN EEFNTTILMV THDPVAASFS NRVVMLKDGQ IFTELYQGDD DKQTFYKEII RTQSVLGGIN YEL
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