Gene SERP0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0297 
Symbol 
ID3242459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp299351 
End bp300163 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content32% 
IMG OID637166966 
ProducttagG protein, teichoic acid ABC transporter protein, putative 
Protein accessionYP_187893 
Protein GI57866197 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.142692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGCAG TTGGAACGGT TTTAAAAGAA CATATTAAAA ACTTCTATTT AATTCAAAGA 
CTAGCACAAT TCCAAATTAA AATTACCAAT CATAATAACT ATCTAGGTAT TGCATGGGAA
GTGTTGAATC CTGCTTTACA AATCATGGTG TATTGGCTTG TTTTTGGTTT AGGAATTAGA
AGCAATGCAC CTATACACGG CATTCCGTTT GTATTTTGGT TGTTAGTTGG TATAAGTATG
TGGTTCTTTA TTAATCAAGG TGTCCTAGAA GGAACTAAAT CAATCTCACA GAAATTCAAT
CAAGTGGCAA AGATGAATTT CCCACTCTCA ATCATTCCTA CTTATATTGT AACAAGTAGG
TTCTATGGTC ATTTAGGATT ATTAGCAATT ATTATAATAG CTTGTATGTT CAATGGAATT
ATCCCTTCAA TTCACATTGT ACAATTACTT ATATATGTAC CTTTTGCATA TTTGCTAACA
TCGTCGGTGG CACTTTTAAC ATCCACTTTG GGGATTTTAA TTAGAGATAC GCAGATGATT
ATGCAAGCAT TAATGAGAAT ATTGTTTTAT ATGTCTCCAA TTTTATGGGT GCCAAAAAAT
CACGGCGTAA GTGGTTTGAT TCATCAAATT ATGTTATTTA ATCCAGTATA TTTTATCGCA
GAATCATACC GAGCAGCGAT ATTGTTCCAT CAATGGTATT TCATAGATCA TTGGAAGTTA
ATGCTATATA ACGTTATTAT CATTCTCTTA TTCTTTATAG TAGGTTCTAT TTTACATAGA
CGCTATAGAG ATCACTTTGC GGACTTCTTG TAA
 
Protein sequence
MFAVGTVLKE HIKNFYLIQR LAQFQIKITN HNNYLGIAWE VLNPALQIMV YWLVFGLGIR 
SNAPIHGIPF VFWLLVGISM WFFINQGVLE GTKSISQKFN QVAKMNFPLS IIPTYIVTSR
FYGHLGLLAI IIIACMFNGI IPSIHIVQLL IYVPFAYLLT SSVALLTSTL GILIRDTQMI
MQALMRILFY MSPILWVPKN HGVSGLIHQI MLFNPVYFIA ESYRAAILFH QWYFIDHWKL
MLYNVIIILL FFIVGSILHR RYRDHFADFL