Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0295 |
Symbol | tagA |
ID | 3242310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 297389 |
End bp | 298147 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637166964 |
Product | UDP-N-acetyl-D-mannosamine transferase |
Protein accession | YP_187891 |
Protein GI | 57866195 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1922] Teichoic acid biosynthesis proteins |
TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00745299 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCAAA ACCAAAGAAT AAAAGATAAA ATTAACATAT TAGGTGTAAG TTTTGATAAT ACTACAATGC TGGAAATGGT AGAAAATATT AAACAATTCA TATCTAGCAA TACAGATGAT AATTTATTTA TAGTGACTGC TAATCCTGAA ATCGTGGATT ATGCAACTGA ACATGAGCTA TATAGAAATT TAATTAATCA AGCTGATTAT GTAGTTCCAG ATGGTACAGG AATAGTAAAA GCTTCAAAGC GATTAAAACA GCCCTTAAAA CGGCGTGTGC CAGGAATAGA ACTTCTTGAA GAATGTCTGA AAATAGCACA TGTCAGCCAT CAGCGCGTAT ATCTGCTTGG ATCTAAAAAT GAAATTGTTG AGTCAGCAGA GAAAAAACTT CAATCTCAAT ACCCTAATAT CCACTTTGCA CATCATCATG GCTATATTCA TCTAGAAGAT GAAACAGTCA TAAAACGTAT AACAAGTTTT AATCCCGATT ACATTTTTGT AGGAATGGGA TTTCCAAAGC AAGAACAATG GATTCAAAAG CATAAGGACA AGTTTAAGCA CACTGTGATG ATGGGCGTAG GTGGGTCGTT TGAAGTATTC AGTGGCTCAA AGAAAAGAGC ACCTCAAATA TTTAGAAAGT TAAATATTGA GTGGGTATAT CGTGTGCTTA TTGATTGGAA ACGCATTGGG AGAATGATAA GTATTCCTAA ATTTATGTTA AAGGTAGCAA TACAAAAATA TAAAATGAAA TCAAAATAA
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Protein sequence | MYQNQRIKDK INILGVSFDN TTMLEMVENI KQFISSNTDD NLFIVTANPE IVDYATEHEL YRNLINQADY VVPDGTGIVK ASKRLKQPLK RRVPGIELLE ECLKIAHVSH QRVYLLGSKN EIVESAEKKL QSQYPNIHFA HHHGYIHLED ETVIKRITSF NPDYIFVGMG FPKQEQWIQK HKDKFKHTVM MGVGGSFEVF SGSKKRAPQI FRKLNIEWVY RVLIDWKRIG RMISIPKFML KVAIQKYKMK SK
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