Gene SERP0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0268 
Symbol 
ID3241313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp275086 
End bp275814 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content32% 
IMG OID637166937 
ProductHAD superfamily hydrolase 
Protein accessionYP_187864 
Protein GI57866248 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.54938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAA ACTGTATTAA GGCTATCGTC TTTGATTTAG AAGGCACGCT ATTAGATAGA 
GTTAAATCGC GTGAAAAGTT TATAGAAGAG CAATATGAAC GGTTTCATGA TTATTTTATT
CATGTGCAAC TAGCAGATTA TAAGAATAAA TTTATTGAAT TAGACGATGA TGAAGACAAC
GATAAACCTG ATCTATATAA GGAAATCATT AAACAATTTC ATATCGACCG TCTTAAATGG
AGAGATTTAT TTAATGACTT TGAAATGCAT TTCTATCGTT ACGTTTTCCC TTACTATGAT
ACTTTGTATA CATTAGAAAA GTTATCGAAA CATCATTACA TGATTGGTGT GATTGCAAAT
GGAAAATCCA AAATTAAACA ATTTAGATTG CATTCATTGG GTATTATGCA CGTTATTAAT
TATTTAACTA CTTCTGAAAC TGTAGGTTAT CGTAAGCCGC ATCCTAAAAT CTTTGAAGAT
ATGATTGATC AATTGGGGGT TAAACCATCT GAAATAATGT ATGTCGGAGA TGATGCATTA
AACGATGTTG CTCCTGCACG TGCAATGGGG ATGGTAAGTG TGTGGTATAA ACAAGAAGAT
GCAGAATTGG AGCCATTAAC AGAAGAAGTA GATTATACGA TTACTACCAT AGAGGAATTG
CTTAAAATTT TACCAGATAA TTTTGAAACA GAAGGAGAAG AACAACATGG CAATGGATTT
AATTACTAA
 
Protein sequence
MNLNCIKAIV FDLEGTLLDR VKSREKFIEE QYERFHDYFI HVQLADYKNK FIELDDDEDN 
DKPDLYKEII KQFHIDRLKW RDLFNDFEMH FYRYVFPYYD TLYTLEKLSK HHYMIGVIAN
GKSKIKQFRL HSLGIMHVIN YLTTSETVGY RKPHPKIFED MIDQLGVKPS EIMYVGDDAL
NDVAPARAMG MVSVWYKQED AELEPLTEEV DYTITTIEEL LKILPDNFET EGEEQHGNGF
NY