Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0268 |
Symbol | |
ID | 3241313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 275086 |
End bp | 275814 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637166937 |
Product | HAD superfamily hydrolase |
Protein accession | YP_187864 |
Protein GI | 57866248 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.54938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAA ACTGTATTAA GGCTATCGTC TTTGATTTAG AAGGCACGCT ATTAGATAGA GTTAAATCGC GTGAAAAGTT TATAGAAGAG CAATATGAAC GGTTTCATGA TTATTTTATT CATGTGCAAC TAGCAGATTA TAAGAATAAA TTTATTGAAT TAGACGATGA TGAAGACAAC GATAAACCTG ATCTATATAA GGAAATCATT AAACAATTTC ATATCGACCG TCTTAAATGG AGAGATTTAT TTAATGACTT TGAAATGCAT TTCTATCGTT ACGTTTTCCC TTACTATGAT ACTTTGTATA CATTAGAAAA GTTATCGAAA CATCATTACA TGATTGGTGT GATTGCAAAT GGAAAATCCA AAATTAAACA ATTTAGATTG CATTCATTGG GTATTATGCA CGTTATTAAT TATTTAACTA CTTCTGAAAC TGTAGGTTAT CGTAAGCCGC ATCCTAAAAT CTTTGAAGAT ATGATTGATC AATTGGGGGT TAAACCATCT GAAATAATGT ATGTCGGAGA TGATGCATTA AACGATGTTG CTCCTGCACG TGCAATGGGG ATGGTAAGTG TGTGGTATAA ACAAGAAGAT GCAGAATTGG AGCCATTAAC AGAAGAAGTA GATTATACGA TTACTACCAT AGAGGAATTG CTTAAAATTT TACCAGATAA TTTTGAAACA GAAGGAGAAG AACAACATGG CAATGGATTT AATTACTAA
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Protein sequence | MNLNCIKAIV FDLEGTLLDR VKSREKFIEE QYERFHDYFI HVQLADYKNK FIELDDDEDN DKPDLYKEII KQFHIDRLKW RDLFNDFEMH FYRYVFPYYD TLYTLEKLSK HHYMIGVIAN GKSKIKQFRL HSLGIMHVIN YLTTSETVGY RKPHPKIFED MIDQLGVKPS EIMYVGDDAL NDVAPARAMG MVSVWYKQED AELEPLTEEV DYTITTIEEL LKILPDNFET EGEEQHGNGF NY
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