Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0205 |
Symbol | |
ID | 3242985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 214448 |
End bp | 215326 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637166874 |
Product | HAD superfamily hydrolase |
Protein accession | YP_187801 |
Protein GI | 57866123 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.855458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAGC TAATAGCAAC TGATATGGAT GGAACATTAC TTAACGCTGG TCATGAAATC ACCACTATGA ATCAAGAAGC GATAAAATTT GCGCAAGCGA ACGGCATTAC AGTAGTTATT GCAACTGGTA GAGCATTTTA TGAGGCACAA ACACCTGTTG CTGAAACAGA CTTAAAAGTA CCTTACATAT GTTTGAATGG TGCAGAAGTT CGTGATGAAT CATTTAATAT AATGAGTACA TCGCATCTTA ATCATGATTT AGTACACAAA ATTACTACAG CACTTAAAAA TAATCATATT TATTATCAAA TTTACACAAA CCGTGGCATA TATACAGAAG ATCCTAAACG TGATTTAGCA ATCTATATAG ATATTGCAGA ACGTGCGGGT CAAAAAGCAG ATGTAGACAA GATACGAAAT AATATACAAA AACGCATAGA TAACGGTACT TTAAAAGTTG TAGATAATTA TGATTCAATT GAAGATATTC CTGGAGAACT TATTATGAAG GTGTTAGCTT TTGATGCAGA TTTAAGTAAA ATCGACCAAG TAGGTCAAGC GTTAGCATCA TCACCAAATT TAGCAGTATC TTCATCATCA AGAGGTAATC TAGAAATCAC TCATTCAAAC GCTCAAAAAG GCATTGCCTT ATCAGCTATT GCTCATCAAT TGGGTATAGA TTTAACAGAT GTGATAGCAA TAGGAGATAA TTTAAATGAT ATTTCAATGC TAGAACGTGT AGGTTATCCA GTAGCAATGA ATAATGCTAC AGACGAAGTT AAACATATTG CTAAATATGT CACAGACACC AATGAAAATA GTGGAGTTGG AAAAGCAATC ATGAAAATAT TAAAAGAAGA AAATAATTTA GAGGTGTAA
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Protein sequence | MIKLIATDMD GTLLNAGHEI TTMNQEAIKF AQANGITVVI ATGRAFYEAQ TPVAETDLKV PYICLNGAEV RDESFNIMST SHLNHDLVHK ITTALKNNHI YYQIYTNRGI YTEDPKRDLA IYIDIAERAG QKADVDKIRN NIQKRIDNGT LKVVDNYDSI EDIPGELIMK VLAFDADLSK IDQVGQALAS SPNLAVSSSS RGNLEITHSN AQKGIALSAI AHQLGIDLTD VIAIGDNLND ISMLERVGYP VAMNNATDEV KHIAKYVTDT NENSGVGKAI MKILKEENNL EV
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