| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0196 |
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| Symbol | ispD |
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| ID | 3242812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 205369 |
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| End bp | 206085 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637166865 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_187792 |
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| Protein GI | 57866163 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0791243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTATG CGGGTATATT AGCAGGTGGT ATTGGTTCTA GAATGGGAAA TGTTCCATTA
CCCAAACAAT TTTTATTATT ACAAGGAAAA CCTATTATTA TTCATACAGT AGAAAAATTT
TTAATGTATA AGGACTTTGA TGAAATCATT ATTGCCACGC CTCAAAAGTG GATCAATTAT
ATGCACGATT TGCTAAACAA TTATCGATTA GACGATAAGA AAATAAAAGT AATACAAGGC
GGCGACGACA GAAATCACAC TATAATGAAT ATTATAGAAA GCATTGAGCA ACATAAAAAA
TTAAATGATG AAGATATCAT CGTTACCCAT GATGCAGTTA GACCATTTCT AACAAATCGA
ATTATTAGAG AGAATGTGGA ATATGCTAGT CAATATGGCG CTGTAGATAC GGTTGTTAAT
GCTGTTGATA CTATCATTTC TTCAAATGAT GCACAATTTA TTTCTGAGAT TCCAATTAGA
AGTGAGATGT ATCAAGGACA GACGCCTCAA ACTTTTAAAA TAAAAGAGTT AAAGGATAGC
TATTTATCGT TAACTCAATC TCAAAAGGAA ATATTAACTG ACGCGTGTAA AATACTCGTA
GAATTGGGTA AGCCAGTAAA ATTAGTCAAA GGAGAGTTAT TTAACATAAA AATTACAACA
CCATATGATT TAAAAGTTGC GAATTCAATT ATTACTGGAG CTGTTGATAA TGATTAA
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| Protein sequence | MIYAGILAGG IGSRMGNVPL PKQFLLLQGK PIIIHTVEKF LMYKDFDEII IATPQKWINY
MHDLLNNYRL DDKKIKVIQG GDDRNHTIMN IIESIEQHKK LNDEDIIVTH DAVRPFLTNR
IIRENVEYAS QYGAVDTVVN AVDTIISSND AQFISEIPIR SEMYQGQTPQ TFKIKELKDS
YLSLTQSQKE ILTDACKILV ELGKPVKLVK GELFNIKITT PYDLKVANSI ITGAVDND
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