Gene SERP0189 details

Gene Information

• Locus tag: SERP0189
• Symbol: tuf
• ID: 3241363
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 197288
• End bp: 198472
• Gene Length: 1185 bp
• Protein Length: 394 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637166858
• Product: elongation factor Tu
• Protein accession: YP_187785
• Protein GI: 57866148
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0050] GTPases - translation elongation factors
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000120666
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAG AAAAATTTGA TCGCTCAAAA GAACATGCCA ATATTGGTAC TATCGGTCAC 
GTTGACCATG GTAAAACAAC TTTAACAGCT GCTATCGCAA CTGTATTAGC TAAAAATGGT 
GACACTGTTG CACAATCATA CGATATGATT GACAACGCTC CAGAAGAAAA AGAACGTGGT 
ATTACAATCA ATACTGCACA TATCGAATAC CAAACTGACA AACGTCACTA TGCTCACGTT 
GACTGCCCAG GACACGCTGA CTATGTTAAA AACATGATCA CTGGTGCAGC TCAAATGGAC 
GGCGGTATCT TAGTTGTATC TGCTGCTGAC GGTCCAATGC CACAAACTCG TGAACACATC 
TTATTATCAC GTAACGTTGG TGTACCAGCA TTAGTTGTAT TCTTAAACAA AGTTGACATG 
GTAGACGACG AAGAATTATT AGAATTAGTT GAAATGGAAG TTCGTGACTT ATTAAGCGAA 
TATGACTTCC CAGGTGACGA TGTACCTGTA ATCGCTGGTT CTGCATTAAA AGCATTAGAA 
GGCGATGCTG AATACGAACA AAAAATCTTA GACTTAATGC AAGCAGTTGA TGATTACATT 
CCAACTCCAG AACGTGATTC TGACAAACCA TTCATGATGC CAGTTGAGGA CGTATTCTCA 
ATCACTGGTC GTGGTACTGT TGCTACAGGC CGTGTTGAAC GTGGTCAAAT CAAAGTTGGT 
GAAGAAGTTG AAATCATCGG TATGCACGAA ACTTCTAAAA CAACTGTTAC TGGTGTAGAA 
ATGTTCCGTA AATTATTAGA CTACGCTGAA GCTGGTGACA ACATCGGTGC TTTATTACGT 
GGTGTTGCAC GTGAAGACGT ACAACGTGGT CAAGTATTAG CTGCTCCTGG TTCTATTACA 
CCACACACAA AATTCAAAGC TGAAGTATAC GTATTATCTA AAGATGAAGG TGGACGTCAC 
ACTCCATTCT TCACTAACTA TCGCCCACAA TTCTATTTCC GTACTACTGA CGTAACTGGT 
GTTGTAAACT TACCAGAAGG TACAGAAATG GTTATGCCTG GCGACAACGT TGAAATGACA 
GTTGAATTAA TCGCTCCAAT CGCTATCGAA GACGGAACTC GTTTCTCAAT TCGTGAAGGT 
GGACGTACTG TTGGATCAGG CGTTGTAACT GAAATCTTTG AATAA 

 

Protein sequence

MAKEKFDRSK EHANIGTIGH VDHGKTTLTA AIATVLAKNG DTVAQSYDMI DNAPEEKERG 
ITINTAHIEY QTDKRHYAHV DCPGHADYVK NMITGAAQMD GGILVVSAAD GPMPQTREHI 
LLSRNVGVPA LVVFLNKVDM VDDEELLELV EMEVRDLLSE YDFPGDDVPV IAGSALKALE 
GDAEYEQKIL DLMQAVDDYI PTPERDSDKP FMMPVEDVFS ITGRGTVATG RVERGQIKVG 
EEVEIIGMHE TSKTTVTGVE MFRKLLDYAE AGDNIGALLR GVAREDVQRG QVLAAPGSIT 
PHTKFKAEVY VLSKDEGGRH TPFFTNYRPQ FYFRTTDVTG VVNLPEGTEM VMPGDNVEMT 
VELIAPIAIE DGTRFSIREG GRTVGSGVVT EIFE