Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0167 |
Symbol | |
ID | 3241300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 173355 |
End bp | 174431 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637166836 |
Product | PilT domain-containing protein |
Protein accession | YP_187763 |
Protein GI | 57866104 |
COG category | [R] General function prediction only |
COG ID | [COG4956] Integral membrane protein (PIN domain superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGGAG GCTATAAATT GAATATAACA AAAGCAATTG TTGTAGCAAT CTATATCATT GTTGGTGCAG CACTTGGTGT TATAATTATA CCCGAAGTTG TTACAGATCT TGGCATTCAT CACCATGCGG TTATCACTAA TTATTATGTA GATGGTTTCA TAGGGATCAT TATATTTTTT ATAATATTTG GATTGTTCAT TAATAAAGTA ACATATGCTT TTAAACAATT TGAACAATTA ATCATGAGAC GTAGTGCGGT AGAAATATTA TTTGCTACAA TTGGTTTAAT TATTGGTTTA TTTATTTCAG TGATGGTTTC TTTTATCTTA GAAATGATAG GTAATTCCAT ATTAAATCAC TTTGTACCTA TGATAATCAC TATTATTTTA TGTTATTTAG GGTTTCAATT TGGTCTGAAA AAAAGAGATG AAATGCTTAT GTTTTTACCA GAGAATATGG CACGTTCCAT GTCTAATAAT ATACGAAGAG CGACACCTAA GATTGTAGAT ACAAGTGCCA TTATCGATGG AAGGATATTA GATATTATAC GTTGCGGATT TATCGATGGT GATATATTGA TACCACAAGG CGTTATAAAT GAATTACAGG TTATAGCGGA TGCTAAAGAT AGCGTGAAAC GTGAAAAAGG TCAAAGAGGA TTAGATATTT TGAATCAACT TTATGATTTA GATTATCCTA CACGCGTTAT ACATCCAACT CAATCCCATA GTGATATAGA TACATTATTA ATTAAATTAG CACAACAGTA TCATGCACAT GTGATTACGA CTGATTTTAA TTTAAATAAA GTATGTCACG TTCAAGGAAT TACAGCACTC AACGTTAATG ATTTATCGGA AGCAATCAAA CCTAATGTAC ATCAAGGCGA CCAGTTAAGT ATTTTATTAA CGAAGATAGG TAAAGAGCCA GGACAAGGCG TAGGATATTT AGATGATGGT ACAATGGTGG TTGTTGATAA CGCGAAGAGT TACATTGGTC AACAAGTTAA TTTAGAGGTC GTAAGTTTGT TACAAACATC ATCAGGAAGA ATTGTTTTTG CGAAATTTGT TGACTGA
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Protein sequence | MEGGYKLNIT KAIVVAIYII VGAALGVIII PEVVTDLGIH HHAVITNYYV DGFIGIIIFF IIFGLFINKV TYAFKQFEQL IMRRSAVEIL FATIGLIIGL FISVMVSFIL EMIGNSILNH FVPMIITIIL CYLGFQFGLK KRDEMLMFLP ENMARSMSNN IRRATPKIVD TSAIIDGRIL DIIRCGFIDG DILIPQGVIN ELQVIADAKD SVKREKGQRG LDILNQLYDL DYPTRVIHPT QSHSDIDTLL IKLAQQYHAH VITTDFNLNK VCHVQGITAL NVNDLSEAIK PNVHQGDQLS ILLTKIGKEP GQGVGYLDDG TMVVVDNAKS YIGQQVNLEV VSLLQTSSGR IVFAKFVD
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