Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0128 |
Symbol | metS |
ID | 3242668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 118526 |
End bp | 120496 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637166781 |
Product | methionyl-tRNA synthetase |
Protein accession | YP_187724 |
Protein GI | 57866027 |
COG category | [J] Translation, ribosomal structure and biogenesis [R] General function prediction only |
COG ID | [COG0073] EMAP domain [COG0143] Methionyl-tRNA synthetase |
TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase [TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAG ATACATTTTA TATAACAACC CCAATATACT ATCCGAGCGG GAACCTACAC ATCGGTCATG CATACTCTAC AGTCGCAGGC GACGTGATAG CTCGCTATAA AAGAATGCAA GGCTATGATG TTCGTTATTT AACTGGCACT GATGAGCACG GTCAAAAAAT CCAAGAAAAA GCTCAAAAAG CTGGCAAAAC AGAACTAGAA TACTTAGATG AAATGATTTC AGGTATTAAA AACTTATGGA GTAAACTTGA GATTTCTAAT GATGATTTTA TTCGAACTAC AGAAGAGCGT CATAAGCAAG TCGTTGAGAA AGTGTTTGAG CGATTATTAA AACAAGGTGA CATTTATTTA GGTGAATACG AAGGTTGGTA TTCTGTTCCT GATGAAACAT ATTATACAGA GTCACAACTT GTTGACCCTG TTTATGAAAA CGGCAAAATT GTAGGTGGTA AAAGTCCTGA TTCTGGTCAC GAAGTCGAAC TTGTAAAAGA AGAAAGCTAT TTCTTCAACA TTAATAAATA TACAGACCGC TTATTAGAAT TTTACGATGA AAATCCAGAC TTTATACAAC CACCATCTAG AAAAAATGAA ATGATTAATA ACTTTATCAA ACCAGGTTTA GAAGATTTAG CAGTATCACG TACATCATTC GATTGGGGTG TACGTGTACC ATCTAATCCT AAACATGTTG TATACGTGTG GATTGATGCA CTTGTTAATT ATATTTCTTC ATTAGGTTAT CTATCTGATG ATGAAACATT ATTTAATAAA TATTGGCCAG CAGACATACA CTTGATGGCT AAAGAAATTG TACGTTTCCA CTCTATTATA TGGCCAATAT TGTTAATGGC GTTGGATTTA CCACTTCCTA AAAAAGTTTT TGCACACGGT TGGATTTTAA TGAAAGATGG TAAAATGAGT AAATCTAAAG GTAATGTCGT AGATCCTAAT GTATTAATTG ATCGTTATGG TCTTGATGCG ACACGTTATT ACTTAATGCG TGAATTACCG TTTGGTTCTG ATGGCGTATT TACACCGGAA GCCTTTGTTG AAAGAACAAA TTACGATCTT GCGAATGATT TAGGTAATCT AGTGAATCGT ACTATCTCTA TGATAAACAA ATATTTCCAC GGCGAATTAC CTGCATACCA AGGTCCAAAA CATGAATTGG ATGAAAAAAT GGAAGCGATG GCGCTTGAAA CTGTTAAATC ATTCAATGAT AATATGGAAA GTTTACAATT TTCTGTTGCT TTATCAACAG TATGGAAATT TATTAGTCGT ACAAACAAAT ATATTGATGA AACTCAACCT TGGGTTCTTG CAAAAGATGA AAATCAACGT GAGATGCTTG GTAATGTAAT GGCACATCTT GTCGAGAACA TTCGTTTCGC TACAATCTTA TTACAACCAT TCTTGACGCA TGCACCTAGA GAGATATTTA AGCAACTTAA TATTAACAAT CCGGATTTAC ATCAATTAGA TAGTCTGCAA CAATATGGTA TGTTGTCAGA GGCAATTACT GTAACTGAAA AGCCAACACC AATTTTCCCA AGATTAGACA CTGAAGCAGA AATTGCTTAT ATCAAAGAAT CAATGCAACC ACCTAAATCA ATAAAACAGT CTGATGAACC CGGTAAAGAG CAAATTGATA TCAAAGATTT TGATAAAGTT GAAATCAAAG CAGCAACCAT TATTGATGCG GAAAATGTAA AAAAATCGGA GAAACTATTA AAAATAAAAG TTGAATTAGA TAATGAACAA CGTCAAATAG TATCTGGTAT AGCTAAGTTT TATCGTCCGG AAGACATTAT TGGTAAAAAA GTTGCAGTTG TTACTAATTT AAAACCAGCT AAATTGATGG GACAAAAATC CGAAGGTATG ATTTTGTCAG CTGAAAAAGA TGGCGTACTT ACCTTGATAA GCTTGCCTAG CGCAATTCCA AATGGTGCAG TAATTAAATA G
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Protein sequence | MAKDTFYITT PIYYPSGNLH IGHAYSTVAG DVIARYKRMQ GYDVRYLTGT DEHGQKIQEK AQKAGKTELE YLDEMISGIK NLWSKLEISN DDFIRTTEER HKQVVEKVFE RLLKQGDIYL GEYEGWYSVP DETYYTESQL VDPVYENGKI VGGKSPDSGH EVELVKEESY FFNINKYTDR LLEFYDENPD FIQPPSRKNE MINNFIKPGL EDLAVSRTSF DWGVRVPSNP KHVVYVWIDA LVNYISSLGY LSDDETLFNK YWPADIHLMA KEIVRFHSII WPILLMALDL PLPKKVFAHG WILMKDGKMS KSKGNVVDPN VLIDRYGLDA TRYYLMRELP FGSDGVFTPE AFVERTNYDL ANDLGNLVNR TISMINKYFH GELPAYQGPK HELDEKMEAM ALETVKSFND NMESLQFSVA LSTVWKFISR TNKYIDETQP WVLAKDENQR EMLGNVMAHL VENIRFATIL LQPFLTHAPR EIFKQLNINN PDLHQLDSLQ QYGMLSEAIT VTEKPTPIFP RLDTEAEIAY IKESMQPPKS IKQSDEPGKE QIDIKDFDKV EIKAATIIDA ENVKKSEKLL KIKVELDNEQ RQIVSGIAKF YRPEDIIGKK VAVVTNLKPA KLMGQKSEGM ILSAEKDGVL TLISLPSAIP NGAVIK
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