Gene SERP0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0128 
SymbolmetS 
ID3242668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp118526 
End bp120496 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content34% 
IMG OID637166781 
Productmethionyl-tRNA synthetase 
Protein accessionYP_187724 
Protein GI57866027 
COG category[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only 
COG ID[COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAG ATACATTTTA TATAACAACC CCAATATACT ATCCGAGCGG GAACCTACAC 
ATCGGTCATG CATACTCTAC AGTCGCAGGC GACGTGATAG CTCGCTATAA AAGAATGCAA
GGCTATGATG TTCGTTATTT AACTGGCACT GATGAGCACG GTCAAAAAAT CCAAGAAAAA
GCTCAAAAAG CTGGCAAAAC AGAACTAGAA TACTTAGATG AAATGATTTC AGGTATTAAA
AACTTATGGA GTAAACTTGA GATTTCTAAT GATGATTTTA TTCGAACTAC AGAAGAGCGT
CATAAGCAAG TCGTTGAGAA AGTGTTTGAG CGATTATTAA AACAAGGTGA CATTTATTTA
GGTGAATACG AAGGTTGGTA TTCTGTTCCT GATGAAACAT ATTATACAGA GTCACAACTT
GTTGACCCTG TTTATGAAAA CGGCAAAATT GTAGGTGGTA AAAGTCCTGA TTCTGGTCAC
GAAGTCGAAC TTGTAAAAGA AGAAAGCTAT TTCTTCAACA TTAATAAATA TACAGACCGC
TTATTAGAAT TTTACGATGA AAATCCAGAC TTTATACAAC CACCATCTAG AAAAAATGAA
ATGATTAATA ACTTTATCAA ACCAGGTTTA GAAGATTTAG CAGTATCACG TACATCATTC
GATTGGGGTG TACGTGTACC ATCTAATCCT AAACATGTTG TATACGTGTG GATTGATGCA
CTTGTTAATT ATATTTCTTC ATTAGGTTAT CTATCTGATG ATGAAACATT ATTTAATAAA
TATTGGCCAG CAGACATACA CTTGATGGCT AAAGAAATTG TACGTTTCCA CTCTATTATA
TGGCCAATAT TGTTAATGGC GTTGGATTTA CCACTTCCTA AAAAAGTTTT TGCACACGGT
TGGATTTTAA TGAAAGATGG TAAAATGAGT AAATCTAAAG GTAATGTCGT AGATCCTAAT
GTATTAATTG ATCGTTATGG TCTTGATGCG ACACGTTATT ACTTAATGCG TGAATTACCG
TTTGGTTCTG ATGGCGTATT TACACCGGAA GCCTTTGTTG AAAGAACAAA TTACGATCTT
GCGAATGATT TAGGTAATCT AGTGAATCGT ACTATCTCTA TGATAAACAA ATATTTCCAC
GGCGAATTAC CTGCATACCA AGGTCCAAAA CATGAATTGG ATGAAAAAAT GGAAGCGATG
GCGCTTGAAA CTGTTAAATC ATTCAATGAT AATATGGAAA GTTTACAATT TTCTGTTGCT
TTATCAACAG TATGGAAATT TATTAGTCGT ACAAACAAAT ATATTGATGA AACTCAACCT
TGGGTTCTTG CAAAAGATGA AAATCAACGT GAGATGCTTG GTAATGTAAT GGCACATCTT
GTCGAGAACA TTCGTTTCGC TACAATCTTA TTACAACCAT TCTTGACGCA TGCACCTAGA
GAGATATTTA AGCAACTTAA TATTAACAAT CCGGATTTAC ATCAATTAGA TAGTCTGCAA
CAATATGGTA TGTTGTCAGA GGCAATTACT GTAACTGAAA AGCCAACACC AATTTTCCCA
AGATTAGACA CTGAAGCAGA AATTGCTTAT ATCAAAGAAT CAATGCAACC ACCTAAATCA
ATAAAACAGT CTGATGAACC CGGTAAAGAG CAAATTGATA TCAAAGATTT TGATAAAGTT
GAAATCAAAG CAGCAACCAT TATTGATGCG GAAAATGTAA AAAAATCGGA GAAACTATTA
AAAATAAAAG TTGAATTAGA TAATGAACAA CGTCAAATAG TATCTGGTAT AGCTAAGTTT
TATCGTCCGG AAGACATTAT TGGTAAAAAA GTTGCAGTTG TTACTAATTT AAAACCAGCT
AAATTGATGG GACAAAAATC CGAAGGTATG ATTTTGTCAG CTGAAAAAGA TGGCGTACTT
ACCTTGATAA GCTTGCCTAG CGCAATTCCA AATGGTGCAG TAATTAAATA G
 
Protein sequence
MAKDTFYITT PIYYPSGNLH IGHAYSTVAG DVIARYKRMQ GYDVRYLTGT DEHGQKIQEK 
AQKAGKTELE YLDEMISGIK NLWSKLEISN DDFIRTTEER HKQVVEKVFE RLLKQGDIYL
GEYEGWYSVP DETYYTESQL VDPVYENGKI VGGKSPDSGH EVELVKEESY FFNINKYTDR
LLEFYDENPD FIQPPSRKNE MINNFIKPGL EDLAVSRTSF DWGVRVPSNP KHVVYVWIDA
LVNYISSLGY LSDDETLFNK YWPADIHLMA KEIVRFHSII WPILLMALDL PLPKKVFAHG
WILMKDGKMS KSKGNVVDPN VLIDRYGLDA TRYYLMRELP FGSDGVFTPE AFVERTNYDL
ANDLGNLVNR TISMINKYFH GELPAYQGPK HELDEKMEAM ALETVKSFND NMESLQFSVA
LSTVWKFISR TNKYIDETQP WVLAKDENQR EMLGNVMAHL VENIRFATIL LQPFLTHAPR
EIFKQLNINN PDLHQLDSLQ QYGMLSEAIT VTEKPTPIFP RLDTEAEIAY IKESMQPPKS
IKQSDEPGKE QIDIKDFDKV EIKAATIIDA ENVKKSEKLL KIKVELDNEQ RQIVSGIAKF
YRPEDIIGKK VAVVTNLKPA KLMGQKSEGM ILSAEKDGVL TLISLPSAIP NGAVIK