| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0114 |
|---|
| Symbol | dnaX |
|---|
| ID | 3241306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 102244 |
|---|
| End bp | 103950 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637166764 |
|---|
| Product | DNA polymerase III, gamma and tau subunits |
|---|
| Protein accession | YP_187710 |
|---|
| Protein GI | 57866110 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATTACC AAGCTTTGTA TCGTATGTAT AGACCGCAAA GTTTTGATGA TGTGGTTGGA
CAAACGCATG TAACTAAAAC GCTGCGTAAT GCAATTTCAA AAGGTAAACA ATCCCATGCA
TATATTTTTA GTGGTCCGAG AGGTACGGGT AAAACTAGTA TTGCAAAGGT TTTTGCCAAA
GCTATTAATT GTCTTAATAG TGACGATGGT GAACCTTGTA ATGAATGTGC GATTTGTAAA
GGAATCACAC AAGGTACGAA TAACGATGTA ATTGAAATTG ATGCTGCAAG TAATAACGGT
GTAGATGAAA TAAGGAATAT TAGAGATAAA GTTAAGTACG CACCTAGTGA ATCTAAGTAT
AAAGTATATA TTATTGATGA GGTTCATATG TTAACTACTG GTGCTTTCAA TGCTTTGCTT
AAAACATTAG AAGAACCACC AGCGCATGCT ATATTTATCT TGGCAACAAC AGAACCACAT
AAAATTCCAC CCACTATTAT TTCGAGAGCG CAACGATTTG ACTTTAAAGC AATTAGCAGT
GACCAAATTA TAGATAGACT TAAGTATGTA GCTAATTCTC AATCTTTGGA TTACGATGAC
GCAGCATTAG AATTTATTGC TAAAGCATCA GAAGGTGGTA TGCGAGATGC ATTAAGCATT
ATGGATCAAG CAATAGCGTT TGGAGACGAA CGACTTACTT TACAAGATGC TTTAAATGTT
ACAGGTAGTG TTGATGAAGC GGCATTAAAT GAGTTATTTA ATGACATTGT AAAAAGTGAT
GTTAAAGCCG CATTTAATAG ATATCATCAT TTTATTTCAG AAGGTAAAGA AGTCAACAGA
CTCATTAATG ATATGATTTA CTTTGTTAGA GATACAATTA TGAATAAAAC GTCTAACGAA
TCCGTTCATT TTGAATCACT TATTCATTTC GACTTAGATA TGTTATACAG GATGATAGAT
ATCATCAATG ATACACTAGT ATCCATTAGG TTCAGTGTAA ATCAAAGTGT TCATTTTGAA
GTGTTGCTAG TTAAACTTGC AGAAATGATT AAGACACAGC CTCAAACTGT ACAAAATGTA
GCAACAGCAT CGGTAGCTAA TGAACCAGAT AATGAGATGT TATTACAACG TTTAGAACAA
CTTGAAAATG AGCTTAAAAC CTTAAAAGAA CAAGGGATCA AAACTAATAA AGTTAGTCAA
CAACCTAAGA AACCAACACG TACGATTCAA CGATCTAAAA ATACGTTTTC TATGCAACAA
ATAGCGAAAG TATTAGACAA AGCAAACAAA GATGATATCA AATTGTTGAA GAACCATTGG
CAAGAAGTGA TTGATCATGC AAAAAGTAAT GATAAAAAGT CTTTAGTAAG TTTGCTACTG
AATTCAGAAC CAGTAGCAGC TAGTGAAGAT CATGTGTTAG TTAAATTTGA TGAAGAAATT
CATTGTGAAA TAGTAAATAA AGATGATGAA AAGAGAAACA ATATTGAAAG TGTAGTTTGT
AATATAGTTA ATAAAACTGT CAAAGTAGTT GGAGTGCCGG CTGACCAATG GCTGAGAGTG
AGAGCAGAGT ACTTACAAAA TCGTAACACC AATGAAACAC ATCAAAGCGA AAAACAAAGC
ACACAACAGT CTCAACAAAT AGATATTGCT CAAAAAGCTA AAGACTTATT TGGTGAGGAA
ACTGTACACT TAGTTGATGA AGACTGA
|
|---|
| Protein sequence | MDYQALYRMY RPQSFDDVVG QTHVTKTLRN AISKGKQSHA YIFSGPRGTG KTSIAKVFAK
AINCLNSDDG EPCNECAICK GITQGTNNDV IEIDAASNNG VDEIRNIRDK VKYAPSESKY
KVYIIDEVHM LTTGAFNALL KTLEEPPAHA IFILATTEPH KIPPTIISRA QRFDFKAISS
DQIIDRLKYV ANSQSLDYDD AALEFIAKAS EGGMRDALSI MDQAIAFGDE RLTLQDALNV
TGSVDEAALN ELFNDIVKSD VKAAFNRYHH FISEGKEVNR LINDMIYFVR DTIMNKTSNE
SVHFESLIHF DLDMLYRMID IINDTLVSIR FSVNQSVHFE VLLVKLAEMI KTQPQTVQNV
ATASVANEPD NEMLLQRLEQ LENELKTLKE QGIKTNKVSQ QPKKPTRTIQ RSKNTFSMQQ
IAKVLDKANK DDIKLLKNHW QEVIDHAKSN DKKSLVSLLL NSEPVAASED HVLVKFDEEI
HCEIVNKDDE KRNNIESVVC NIVNKTVKVV GVPADQWLRV RAEYLQNRNT NETHQSEKQS
TQQSQQIDIA QKAKDLFGEE TVHLVDED
|
|---|
| |