Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0101 |
Symbol | |
ID | 3241006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 86000 |
End bp | 87505 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637166751 |
Product | glycosyl transferase, group 1 family protein |
Protein accession | YP_187698 |
Protein GI | 57866083 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATATACA CAGTAACAAC CACCCTTCCA TTATCCCATG GTGGTAGAAC TCAAGCTTTA CTCAGACGAA TTAAACTGTT AGATGAAGAA TTTAAAATTC CAAGTAAAAT TCTCACCACT AATTATCATG GTAATTATCC TAGTATTTAT AAAAAATACA GACAAGAAAA CAAAGTTACA GAAAATATAC AATTCGAGAA TATGTATGAA TGGTTATCAA ATTTCAAACT TTTTAAAGTC CCAAAAACAT TGATTACTAG GAATCCAAAA TACATTAAAA CACCTAGAAA GATTAAAGGA CTTATTGATA AGCAAGGAAA AAAGAGTGGT CTTATTCATT ATTATAATAA TGAATGTCAT GTGAGATCTC GAAAGTATTA TGGACAGTCT AATGTTCTTG AATATGAGGA CTTCATTTCT CCCACATCAG GATTGAAATA TGAGCGCCAT CAATATAACT TATACGGCCA ACTTCATAGA AAAGAATATT ATTATGATGA CTCTTCTTTA AAACATAGCG ACGAATTATT TGATACTGAG GGCTCTATGT ACTGCAAGAG ATATTTCAAA ACTAAACCAA ACAGCAAAAT TAATGGCGTA GAAATATATA GAAATAAAAA ACTTTATAAG ACCTTTAAAA ATGATAAATT ATTAGCTCAG TTTTATTTTC AGAATAGATT CAAAAATCAA GATATCGTCT TTAATGATGC TCGATTTTTA GATAAACCAT TACTTAAACA AACGCACCAA ACAAAAAATA TTCTTGTTTT ACATAGCTCG CATTTATCAG GGGACCAAAT AAAAAAATCA TATCGATTTG CTTTAAATCA ATCAAAAAAT GTTTATAAGT ATATTGTTCT CACTCACCAA CAAAAGCACG ATATACAGCA ACATTTCCAT ATAAGTGACG ACCAATTCCA ACTAGTACCA CATTTTATCG AATTAGATAC GGAGGTAGAA CAAGATTCCT CAAACAATCA AAATCGCTTT ATATATATAG GCCGTTTTAG CACAGAGAAA CAGATTGATC ATATTATTAG AGCTTATCAC AAGTTTTTGC AAAGTGGTTA CCAAACAGAA TTACATTTAT TTGGTAGAGA TGAAGATAAT CAAATTCCAT TGATGAATAC TTTGATTTCA GAATTAAAAT TATCGGATAA AGTTAAAATA TTTAAATATA CCAATCAACC TTTACAAGAA TTTAAGAATT CTAAAGCCTC TCTACTTACA AGTCAATATG AGGGATTTGG CTTAACACTT ATGGAAAGTA TAGAAATGGG GTGTCCAGTC CTATCTTATA ACGTTCGTTA CGGTCCAAGT GAAATTATTC AAAACGGGAT AAATGGCTAT CTCATTGAAA AAAATGATAT TGATAGTTTA TCAAAACATA TGATTAACAT CATTGAGCAC CCACTACAAA AAGTGAAAAA TAAAGACACT TTAAAATATA ACGCCGCAGT GAATAATTAC AAACAACTTA TGCAAAGCTT AGACTTATTA AAATAG
|
Protein sequence | MIYTVTTTLP LSHGGRTQAL LRRIKLLDEE FKIPSKILTT NYHGNYPSIY KKYRQENKVT ENIQFENMYE WLSNFKLFKV PKTLITRNPK YIKTPRKIKG LIDKQGKKSG LIHYYNNECH VRSRKYYGQS NVLEYEDFIS PTSGLKYERH QYNLYGQLHR KEYYYDDSSL KHSDELFDTE GSMYCKRYFK TKPNSKINGV EIYRNKKLYK TFKNDKLLAQ FYFQNRFKNQ DIVFNDARFL DKPLLKQTHQ TKNILVLHSS HLSGDQIKKS YRFALNQSKN VYKYIVLTHQ QKHDIQQHFH ISDDQFQLVP HFIELDTEVE QDSSNNQNRF IYIGRFSTEK QIDHIIRAYH KFLQSGYQTE LHLFGRDEDN QIPLMNTLIS ELKLSDKVKI FKYTNQPLQE FKNSKASLLT SQYEGFGLTL MESIEMGCPV LSYNVRYGPS EIIQNGINGY LIEKNDIDSL SKHMINIIEH PLQKVKNKDT LKYNAAVNNY KQLMQSLDLL K
|
| |