Gene SERP0060 details

Gene Information

• Locus tag: SERP0060
• Symbol: ahpC
• ID: 3242975
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 47868
• End bp: 48437
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637166711
• Product: alkyl hydroperoxide reductase, C subunit
• Protein accession: YP_187658
• Protein GI: 57866005
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0450] Peroxiredoxin
• TIGRFAM ID: [TIGR03137] peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.808024
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTTAA TTAACAAAGA AATTTTACCT TTCACAGCAC AAGCTTATGA TCCAAAAAAA 
GATGAGTTTA AAGAAGTTAC TCAAGAAGAT TTTAAAGGTT CTTGGAACGT TGTATGTTTC 
TATCCTGCTG ACTTCTCATT CGTATGCCCT ACTGAATTAG AAGATTTACA AAATCAATAC 
GCTAAATTAC AAGAATTAGG TGTTAACGTG TACTCAGTAT CAACAGATAC ACACTTCGTA 
CACAAAGCTT GGCATGACCA TTCTGATGCA ATCAGCAAAC TAGAATACAG CATGATTGGT 
GATCCTTCTC AAACAATCAC TCGCAATTTC GATGTGTTGG ATGAAGAAAC TGGTCTAGCA 
CAACGTGGTA CTTTCATTAT CGACCCTGAT GGTGTGGTAC AAGCAGCAGA AATCAATGCT 
GACGGAATCG GACGTGACGC AAGTACATTA GTTAACAAAA TTAAAGCCGC TCAATATGTA 
CGTCAACATC CAGGTGAAGT TTGCCCAGCT AAATGGGAAG AAGGTTCAGA ATCATTACAA 
CCTGGTTTAG ACTTAGTAGG TAAAATCTAA 

 

Protein sequence

MSLINKEILP FTAQAYDPKK DEFKEVTQED FKGSWNVVCF YPADFSFVCP TELEDLQNQY 
AKLQELGVNV YSVSTDTHFV HKAWHDHSDA ISKLEYSMIG DPSQTITRNF DVLDEETGLA 
QRGTFIIDPD GVVQAAEINA DGIGRDASTL VNKIKAAQYV RQHPGEVCPA KWEEGSESLQ 
PGLDLVGKI