Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0043 |
Symbol | |
ID | 3242660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 39203 |
End bp | 40012 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637166696 |
Product | lysozyme domain-containing protein |
Protein accession | YP_187643 |
Protein GI | 57865982 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAGA AATTTTCTTA CTCAATCATT TCACTTTCAA TTTTCGCTAC TAGCCTTAAT TTTATAGATA CTCAAGCACA AGCGTCTTCA TCTTCTGTAA GCGAAAAAGG TACAATGGGG TATGGCTATC AACAATACTT AAAAGACCAT CCTAAAAAGC AAACTCATAA AACACAAAAT CGTTCTACTT TCTCTGCTGA ATCTAATATT ACTGAAACAA ATAATGGTGA AAGAGTCTTA GATATTTCTG AATGGCAAGG ACTTTTAACT AATGAACAAA TAAAACAACT AAAGAAAAAT TATGATTTTA TTATTTTAAG AGCACAGTAC GGTTCAGAAT ACGTTGATAA GACTTTTGAA AAAAATGCAG AATTATTAGA ACAAAATAAA ATGAAATACG GCGTGTACTC TTATAGCATG TACGAAAGTC CAAAAGATGC ACGTTATGAA GCTAAAACTT TATCTCAACG TGCTCCCAAA GCCGCCTTTT ACATTAATGA TTATGAAGAA CAAACCGTTA AATCCGGAGA TGATGAAACA GCGACACAAG CATGGGCAAA CGAAATGAGA AAGCTTGCTG GAAACAAGAA GATCCTTTTT TATTCATATG AAAATTTCAT GTTAAATCAT GCATCAAATG CTGTCAGTTC ATATGATGGC TACTGGTTAG CAGCATATCA AGCTGAGGAA CCAAAACGAG AGAAAGTGCT ATGGCAATAT ACAGATAGTT ACTACTCTCC TGAATTAAAT CAAAATGTCG ATGCAAATTA TATTGACGAA AATGTGAATT CGTCTTGGTT CACTTCATAA
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Protein sequence | MLKKFSYSII SLSIFATSLN FIDTQAQASS SSVSEKGTMG YGYQQYLKDH PKKQTHKTQN RSTFSAESNI TETNNGERVL DISEWQGLLT NEQIKQLKKN YDFIILRAQY GSEYVDKTFE KNAELLEQNK MKYGVYSYSM YESPKDARYE AKTLSQRAPK AAFYINDYEE QTVKSGDDET ATQAWANEMR KLAGNKKILF YSYENFMLNH ASNAVSSYDG YWLAAYQAEE PKREKVLWQY TDSYYSPELN QNVDANYIDE NVNSSWFTS
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