Gene SERP0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0039 
Symbol 
ID3242656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp36497 
End bp37372 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content31% 
IMG OID637166692 
Producthypothetical protein 
Protein accessionYP_187639 
Protein GI57865978 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAC TTAAACATAT TTTATCTTCA TTGTTCGAAC CTTTAACAAA GGTTGAAACA 
TATGAAAATT TAATTACTAA AGTAATAATG ATTTTAATTT ATATCCTTGT AGCGATTGTT
GTTATAGCAA TTTTGAATAA GATTATTGAG CAAGCATTTA AAATTCAAAA TAAAAGCAAA
AAAGGAAATA AAAAACGTTC AAAAACACTG ATTTCTCTTG TACAAAACAT AGTAAAATAT
ATCGTATGGT TTGTTGTTAT CACAACAATT TTAAGTAAGT TTGGTATTAG CGTCGAAGGT
ATCATCGCTA GTGCTGGAGT TGTAGGTATT GCAGTTGGTT TCGGTGCGCA AACGATAGTA
AAAGATATTA TTACAGGTTT CTTTATTATC TTTGAAAATC AATTTGATGT GGGTGACTAT
GTTAAAATCA ATAGTTCAGG AACTACGGTA GCAGAAGGTA CTGTGAAATC TATTGGTTTA
AGATCAACGC GAATTAATAC AATTTCGGGA GAACTGACTA TTTTACCTAA TGGTAGCATG
GGGGAAATTA CGAACTTTTC AATTACAAAT GGGACTGCTA TTGTAGAACT ACCAGTATCA
GTTGATGAAA ATATAGATCA AGTTGAAAAG AAACTCAATC GTTTATTTGT TTCTTTACGT
AGTAAATATT ACTTATTTGT CAGCGATCCA GTTGTTGATG GTATTGATGC GATAGAATCT
AATAAGGTTA CTATACGAAT TTCAGCAGAA ACAATTCCTG GTGAAGGATT TTCAGGCGCT
CGTATTATTC GTAAGGAAGC TCAAAAAATG TTTAGACAAG AAGGTATTCG CATGCCACAA
CCAGTCATTT CAAATTATAA TGAAGGAAAA AGCTAA
 
Protein sequence
MNQLKHILSS LFEPLTKVET YENLITKVIM ILIYILVAIV VIAILNKIIE QAFKIQNKSK 
KGNKKRSKTL ISLVQNIVKY IVWFVVITTI LSKFGISVEG IIASAGVVGI AVGFGAQTIV
KDIITGFFII FENQFDVGDY VKINSSGTTV AEGTVKSIGL RSTRINTISG ELTILPNGSM
GEITNFSITN GTAIVELPVS VDENIDQVEK KLNRLFVSLR SKYYLFVSDP VVDGIDAIES
NKVTIRISAE TIPGEGFSGA RIIRKEAQKM FRQEGIRMPQ PVISNYNEGK S