| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0033 |
|---|
| Symbol | |
|---|
| ID | 3242979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 27690 |
|---|
| End bp | 28433 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637166686 |
|---|
| Product | cyclase, putative |
|---|
| Protein accession | YP_187633 |
|---|
| Protein GI | 57866009 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1878] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAGT ATCCACTTTG GAATCAATTA AATACTTTAA AAGAGGCTCA GTGGGTCGAT
TTAACACATA CTTTCGACCC AAATATCCCT CGTTTTAGCG AATTTGAAAA AGGTGAAGTC
TCAACGCTAT TCAATGTTAA AGATCATGGG TTTTATGTAC AACGTTGGAG TATCGTAACT
CAATATGGAA CACACATTGA TGCTCCAATC CATTTCGTTG AAAATAGAAG ATATTTAGAA
GAATTAGATT TAAAAGAACT TGTTTTACCA TTAATTGTTT TAGATTATTC TAAAGAAGCT
GCACAAAATT CAGATTTTAT CGTATCACGT AAACATTTAG AAGATTGGGA ACAACAACAC
GGTCGCATTG AAGCAGGTAC TTTTGTCGCA TTACGTACTG ATTGGTCAAA ACGTTGGCCA
GATATAGAAA AATTTGAAAA TAAAGATGTA GATGGCCATC AACATCTTCC AGGTTGGGGC
CTTGATGCAT TAAAATTTCT CATTGAAGAA CGTGGTGTTA AATCCATAGG TCACGAAACA
TTTGATACTG ATGCCTCAAT TGATACAGCT AAAAATGGTG ATATTGTTGG CGAAAGATAT
ATCTTAGGTC AAGACACATT CCAAGTCGAA TTACTTACCA ATTTAGATCA ATTACCTACC
AGAGGTGCAA TTATCTATGC AATCAGCCCA AAACCAAAAG ATGCACCAGG CTTTCCAGTT
CGTGCATTCG CAATAAAACC TTAA
|
|---|
| Protein sequence | MSQYPLWNQL NTLKEAQWVD LTHTFDPNIP RFSEFEKGEV STLFNVKDHG FYVQRWSIVT
QYGTHIDAPI HFVENRRYLE ELDLKELVLP LIVLDYSKEA AQNSDFIVSR KHLEDWEQQH
GRIEAGTFVA LRTDWSKRWP DIEKFENKDV DGHQHLPGWG LDALKFLIEE RGVKSIGHET
FDTDASIDTA KNGDIVGERY ILGQDTFQVE LLTNLDQLPT RGAIIYAISP KPKDAPGFPV
RAFAIKP
|
|---|
| |