Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0025 |
Symbol | |
ID | 3242488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 20789 |
End bp | 22153 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637166678 |
Product | major facilitator family transporter |
Protein accession | YP_187625 |
Protein GI | 57865987 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTCG TTAAATCAAA AACTGACTTA TTTAGACTCA TAGACAATGA AGCGCAAACA TCGACATCTA AGATGGTTTT ATTCTTAATA TTAGGAACTA TATTTTTAGA TGCATATGAT ATTACTATTT TAGGTACAAT GACTGATCAA CTCACTCAAC AGTTTCACTT ATCACCATCA ACGCTATCTA TAGTAATGAC CTCTTTACCT ATTGGTGCAT TATTTGGTGC ATTACTTGGT GGTACATTAG CACATCAGTT TGGACGCAAG CGTATTTTAT CAATTGCCTT ACTAACACTC ACTGTAACCT CTCTTGGTGC GGCACTCGCA CCAAATGTAA TTATTCTAAT AATATGTCGT TGTATAATGG GGTTTGCTAT TGGAATGGAT AGTCCAGTTG CTTTCACTTT TATTGCGGAA ATAAGTAATT TAAAGCACAA AGGAAGAAAT GTTAACTATT GGCAAGTCGT TTGGTATGTT GCAATAGTTA CTTCTGCTTT AGTGGTCACT GCGTTCTTTA TGCTAGGGGC TGGTGCACAT TTGTGGAGAT ATGCAGTTGG ATTTGGTGCA CTTATTGCTT TTGTCTTGTA CATCTTGCGA ATTAAATATT TACACGAAAG TCCGACATGG GTGATTAATC ATTATTCTTT AGAAAAAGCA ACTGAATTTA TAAGAAAATA TTATCATAAA GACATCCACC TAGAGGGAAC GCTTGAAGAT GATTTAAATT CTGATGTGAC TTCGCCACAT AATTCTTGGA CAGACTTATT TAAACCGAGA TATATAAAAA GAATTATCCT GGCGACTGCG ATTTCAACAT TACAAGGTAT GCAGTACTAT GGTGTCGGTT TATACATACC TATTATTGCA ACTTATCTTA TTAGTAAGGA TAAAATAGGT GTATTATTAG GTACTGCTAT AGTCAATATA GCAGGTATTC TAGGCGCATA TTTAGGTGCT CAATTGACTT ATAAATTAGG TACACGCAAG CTTACAATGA TAGGCTTCAC ACTTGTATTA CTTTCAATGG TATGTGTAGG ACTCTTTTAT CATCATCTAC CAATGCTTCT TAACACTTTC CTTATTGGAT TATTTTTATT TGGCCATTCA GGAGGTCCTG GTACTCAAGG AAAAACAATT GGTGCCTTAT CATTTCCGAC TCATTTACGT TCACAAGCTA CTGGCTTTGT AGAATCTGTA AGTCGTACTG GTAGTATCAT AGGTACTTTT GTCTTTCCAA TCATTCTTGC TGCAGTAGGT CTAACGAATA CTATGTTAAT CTTGTCCATT GTCCCTTTAC TCGGAATTAT CATAACAGTA TCTATAAAAT GGGAAGCTGT CGGTAAGCAT ATTGAAGTAG AATAA
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Protein sequence | MDFVKSKTDL FRLIDNEAQT STSKMVLFLI LGTIFLDAYD ITILGTMTDQ LTQQFHLSPS TLSIVMTSLP IGALFGALLG GTLAHQFGRK RILSIALLTL TVTSLGAALA PNVIILIICR CIMGFAIGMD SPVAFTFIAE ISNLKHKGRN VNYWQVVWYV AIVTSALVVT AFFMLGAGAH LWRYAVGFGA LIAFVLYILR IKYLHESPTW VINHYSLEKA TEFIRKYYHK DIHLEGTLED DLNSDVTSPH NSWTDLFKPR YIKRIILATA ISTLQGMQYY GVGLYIPIIA TYLISKDKIG VLLGTAIVNI AGILGAYLGA QLTYKLGTRK LTMIGFTLVL LSMVCVGLFY HHLPMLLNTF LIGLFLFGHS GGPGTQGKTI GALSFPTHLR SQATGFVESV SRTGSIIGTF VFPIILAAVG LTNTMLILSI VPLLGIIITV SIKWEAVGKH IEVE
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