Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0021 |
Symbol | |
ID | 3242384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 17991 |
End bp | 18749 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637166674 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_187621 |
Protein GI | 57865974 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATTT TAACAGCAAA TCAATTATCA AAAGTATATG GTCACAAACA AAAATATCGA GCTTTAAATA ATATAAGTTT TTCAGTTGAA AAAGGGGAAT TTGTAGCTGT CATGGGTCCT TCTGGATCAG GTAAAACGAC TTTACTCAAT GTGTTAAGTT CAATAGATAC TATTTCAGGA GGAACTGTAG AAGTTGAAGG TAAAGAAATT AATAAACTGA GCCACAAAGA AGTGGCAAAT TTTCGAAAAC AACATCTCGG TTTTATTTTT CAAGATTATA GCGTTTTACC CACATTAACA GTAAAAGAAA ATATTATGCT ACCACTCTCA GTACAAAAAT TCCATAAATA TGAAATGGAA CAAAATTATA AAGAAGTGGC TGAGGCATTA GGTATTTATA ACCTGGGAAA TAAATATCCA AGTGAAATTT CTGGCGGTCA GCAACAACGT ACGGCGGCAG CCCGGGCATT CGTCCATAAA CCAACAATTA TTTTCGCAGA TGAACCTACT GGCGCATTAG ATTCTAAAAG TGCTCAAGAT TTGTTACACC GTCTAGAAGA TATGAATAAA CAATTTAATT CAACCATTAT GATGGTGACA CATGATCCTT CAGCCGCTAG TTACGCTGAG AGAGTCATTA TGTTGAAAGA CGGTGATATA CACTCAGAAA TCTACCAGGG TAACGATTCA AAACAAACAT TTTACCAAGA AATTATGAAA CTTCAAACCG CATTAGGTGG TGTCAGTCAT GACATTTAA
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Protein sequence | MAILTANQLS KVYGHKQKYR ALNNISFSVE KGEFVAVMGP SGSGKTTLLN VLSSIDTISG GTVEVEGKEI NKLSHKEVAN FRKQHLGFIF QDYSVLPTLT VKENIMLPLS VQKFHKYEME QNYKEVAEAL GIYNLGNKYP SEISGGQQQR TAAARAFVHK PTIIFADEPT GALDSKSAQD LLHRLEDMNK QFNSTIMMVT HDPSAASYAE RVIMLKDGDI HSEIYQGNDS KQTFYQEIMK LQTALGGVSH DI
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