| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0016 |
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| Symbol | |
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| ID | 3242379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 11574 |
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| End bp | 12770 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637166669 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_187616 |
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| Protein GI | 57865969 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAACT TTTCAAATGT CATATCAGTT GCTATTCGTT CCATTTTAAA AAACAAACGA
CGTAATATCT TTACGATGAT TGGAATAATT ATTGGTATCG CATCAGTAAT TACTATCATG
TCGTTGGGGA ACGGTTTTAA GAAGTCAACG ACTGAGCAAT TCAATGATGC TGGTGCTGGT
AAAAATCAAG CTTCAATTTC TTACATGACA GAAAATATGG AAGCGCCTAA AAATAATCCA
TTTAAGCAAG AGGATATGAG TGTTGTTGAA CAGGTTAATG GTGTTAAGAG TGCTAAAGTA
AAAGAGGATA AGGATAGCAC ATATTCAGTC AAAATTACGA ATACACATGG CAGTAGTGAT
GCTAGTTTAA AAAAGGTTGA TAAACTGACA GATGTAGATG AAGGAAAAGG ATTTACGAAT
GATGATAATG AAGTGCTAGA AAAAGTAGCC GTTATAGATA AAAAAATTGC TAAAAAAGTA
TTCAATAATC AGGCAATGGG TCAATCTATT TATATAAATG GAGAAGGGTT TAAAGTCGTA
GGCGTCTCTG AAAGCTCAGA AGTCGATGAA AGTGGGATGC CTATTGAGTC ATTAATTCAA
ATACCTTCAA AAACATTTAA TAAATATATG GGCAATTTGA CACAAGGTAT GCCTCAATTA
TTAGTTACAG TTGAAAAAGG TTCAGATAAG AAAGACGTAG GTAAAAAGGT CGAAAAAGTG
TTGAATAAAA AAGGAACTGG CGTATCTGAA GGTCAATATA GTTATGAAGA TAATGAAGCG
GTGATGAAAA CGATAGGTTC AGTCTTAGAC ACGATTACTT ACTTTGTCGC AGCTGTTGCG
GGAATATCAC TCTTTATTGC AGGTATTGGT GTGATGAATG TCATGTATAT TTCAGTCACT
GAACGAACAG AAGAGATTGC AATTCGTCGT GCATTTGGCG CTAAAGGTCG AGATATTGAA
ATACAATTCT TAGTAGAAAG TGTTGTGTTA TGTCTCATAG GTGGTATCAT CGGATTAATT
CTAGGTATTA TTATTGCTAC ATTGATTGAT CTCGTGACAC CTGAAATGGT TAAGAGTTCC
GTCAGTCTAG GTTCCGTCAT CCTAGCTGTA GGTGTATCAA CATTGATAGG CATCATTTTC
GGTTGGATAC CTGCACGTTC AGCTTCTAAA AAAGAATTAA TTGATATTAT TAAATAA
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| Protein sequence | MNNFSNVISV AIRSILKNKR RNIFTMIGII IGIASVITIM SLGNGFKKST TEQFNDAGAG
KNQASISYMT ENMEAPKNNP FKQEDMSVVE QVNGVKSAKV KEDKDSTYSV KITNTHGSSD
ASLKKVDKLT DVDEGKGFTN DDNEVLEKVA VIDKKIAKKV FNNQAMGQSI YINGEGFKVV
GVSESSEVDE SGMPIESLIQ IPSKTFNKYM GNLTQGMPQL LVTVEKGSDK KDVGKKVEKV
LNKKGTGVSE GQYSYEDNEA VMKTIGSVLD TITYFVAAVA GISLFIAGIG VMNVMYISVT
ERTEEIAIRR AFGAKGRDIE IQFLVESVVL CLIGGIIGLI LGIIIATLID LVTPEMVKSS
VSLGSVILAV GVSTLIGIIF GWIPARSASK KELIDIIK
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