Gene SERP0004 details

Gene Information

• Locus tag: SERP0004
• Symbol: gidA
• ID: 3240517
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 2781
• End bp: 4658
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637166657
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_187604
• Protein GI: 57865943
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.100319
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTTCAAG AATATGATGT AGTAGTCATT GGTGCTGGTC ACGCCGGTAT TGAAGCAGGT 
TTAGCTTCAG CTCGTCGGGG TGCTAAAACG CTGATGTTAA CAATTAATTT AGATAATATT 
GCTTTCATGC CATGTAATCC ATCTGTAGGT GGTCCTGCGA AAGGAATCGT TGTACGTGAA 
ATAGACGCTT TAGGTGGACA AATGGCAAAA ACTATTGATA AAACTCACAT TCAAATGCGT 
ATGCTTAATA CAGGTAAAGG TCCAGCTGTT AGAGCTTTAC GTGCTCAAGC AGATAAAGTA 
TTATATCAAC AAGAAATGAA GCGTGTACTT GAGAATGAGG ATAATTTAGA CATCATGCAA 
GGTATGGTTG ATGAACTCAT TATAGAAGAT AATGAAGTTA AAGGTGTTCG TACTAATATT 
GGTACAGAAT ATCGTTCTAA AGCTGTCATT ATTACAACAG GTACATTCTT ACGTGGAGAA 
ATTATACTAG GAAACTTAAA ATATTCTAGT GGCCCTAACC ATCAATTACC ATCTGTAACT 
CTAGCAGATA ATTTAAGAAA ATTAGGATTT GATATCGTTA GATTTAAAAC GGGTACACCA 
CCACGTGTAA ATGCGAGAAC CATCGATTAT TCTAAAACTG AAATCCAACC AGGTGATGAT 
ATAGGTCGAG CGTTTAGTTT TGAAACAACC GAATTTATTT TAGATCAATT ACCTTGTTGG 
TTAACTTATA CAAATGGAGA TACACATCAA GTCATTGATG ATAACTTACA TTTATCTGCT 
ATGTATTCCG GTATGATTAA AGGTACAGGT CCTAGATATT GTCCATCAAT TGAGGATAAA 
TTTGTCCGCT TTAACGATAA ACCAAGACAT CAACTTTTCT TAGAACCTGA AGGACGTAAT 
ACGAATGAGG TATACGTGCA AGGATTATCT ACTAGTTTAC CTGAACATGT TCAACGTCAA 
ATGTTAGAAA CCATTCCAGG TCTTGAAAAA GCAGATATGA TGCGTGCGGG TTATGCTATT 
GAATATGATG CAATCGTGCC TACTCAATTA TGGCCAACGT TAGAAACAAA AGCGATCAAA 
AACTTGTATA CTGCAGGTCA GATTAATGGA ACATCAGGAT ATGAAGAAGC AGCGGGACAA 
GGAATCATGG CAGGTATTAA CGCTGCTGGT AATGTTTTAG GTACAGGTGA AAAAATACTC 
AGCCGTTCAG ACGCATATAT TGGTGTACTT ATAGATGATT TAGTCACTAA GGGTACAAAT 
GAACCGTATC GATTATTAAC TTCACGTGCG GAATATCGAT TATTACTACG TCATGATAAT 
GCTGATTTAC GTCTTACTGA TATGGGGTAT GAATTAGGTT TAATATCAGA AGAACGCTAT 
GCAAGATTTA ATGAAAAACG TCAACAAATC AAAGATGAAA TACAACGACT TACCGATGTA 
CGTATTAAAC CAAATGAACA TACGCAAGCA ATTATTGAAG CTAAGGGTGG TTCAAGATTA 
AAAGATGGCA TATTAGCGAT TGATTTATTA CGTCGTCCGG AAATGAACTA CGAAACAATT 
TTAGAAATCT TAGAAGAATC ACATCAACTT CCTGAAGCGG TTGAGGAACA AGTTGAAATT 
CAAACAAAAT ATGAAGGTTA TATCAATAAA TCTTTACAAC AAGTAGAAAA AGTTAAAAGA 
ATGGAAGCGA AAAAAATTCC TGAGGATTTA GATTATAGCA AGGTAGATAG TTTAGCATCT 
GAAGCACGCG AAAAGTTAGC TGAAGTTAAA CCATTAAATA TTGCACAGGC TTCACGAATT 
TCAGGTGTGA ATCCAGCAGA TATCTCAATT CTACTTGTTT ATTTAGAACA AGGTAAACTT 
CAAAGGGTGA AACAATAA 

 

Protein sequence

MVQEYDVVVI GAGHAGIEAG LASARRGAKT LMLTINLDNI AFMPCNPSVG GPAKGIVVRE 
IDALGGQMAK TIDKTHIQMR MLNTGKGPAV RALRAQADKV LYQQEMKRVL ENEDNLDIMQ 
GMVDELIIED NEVKGVRTNI GTEYRSKAVI ITTGTFLRGE IILGNLKYSS GPNHQLPSVT 
LADNLRKLGF DIVRFKTGTP PRVNARTIDY SKTEIQPGDD IGRAFSFETT EFILDQLPCW 
LTYTNGDTHQ VIDDNLHLSA MYSGMIKGTG PRYCPSIEDK FVRFNDKPRH QLFLEPEGRN 
TNEVYVQGLS TSLPEHVQRQ MLETIPGLEK ADMMRAGYAI EYDAIVPTQL WPTLETKAIK 
NLYTAGQING TSGYEEAAGQ GIMAGINAAG NVLGTGEKIL SRSDAYIGVL IDDLVTKGTN 
EPYRLLTSRA EYRLLLRHDN ADLRLTDMGY ELGLISEERY ARFNEKRQQI KDEIQRLTDV 
RIKPNEHTQA IIEAKGGSRL KDGILAIDLL RRPEMNYETI LEILEESHQL PEAVEEQVEI 
QTKYEGYINK SLQQVEKVKR MEAKKIPEDL DYSKVDSLAS EAREKLAEVK PLNIAQASRI 
SGVNPADISI LLVYLEQGKL QRVKQ