| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2786 |
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| Symbol | dnaE |
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| ID | 2739175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2839313 |
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| End bp | 2842762 |
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| Gene Length | 3450 bp |
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| Protein Length | 1149 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637161686 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | NP_973384 |
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| Protein GI | 42528286 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTCG ATTTTGTTCA TCTTCATGTT CATTCCGATT TTTCTCTTTT AGACGGAGCT
GCTTCGGTCA AAGCTCTTGC GGCAAAGGCC GAAAAGCTGG GGCAGACAGC CCTTGCATTG
ACCGATCACG GCAATATGTT CGGGGCTATA AATTTTTATA ATGCCTGTAA AGAAAAAAAT
ATAAAACCCA TAATCGGCTG CGAATTCTAT GTTGCTCCCG AAAGCCGGTT TGAAAAAAAA
GAAACTCCGG GCGGGAAAAA ATACTACCAC CTTATCCTCT TGGCAAAGAA TGAAACAGGA
TACCGCAATT TAATGGTGCT TTGCTCTAAG GGATATACTG AGGGCATGTA TTATAAGCCG
CGTATAGATG ATGAGCTTTT GGCACAGTAT GCGGAAGGGC TTATATGCTT GTCGGCCTGT
CTTGCAGGAG AGCTTCCTGT TCTTTTATTA AACGGCGAAA AAGAAAAGGC CGAAGCCCAT
GTCCGAAAAT ACCGTGAGAT TTTCGGTGCC GAAAATTATT TTATCGAGCT TCAAGACCAC
GGACTAAAAG AAGAAAAAAA GGCTTCCAAA CTTTTAATCG AGATGGCCCG CAAGGTCGGC
GTTCCTTTGG TTTTGACCAA CGATATTCAT TATGTAGAAC AAAAAGATTA TGTAGCTCAA
GATATTTTAA TGTGTATCGG AATGAAAAAA CTTAGAACCG ATACCAACCG CATGCAGTTT
GAGGGAAGCG AATTTTATTT TAAGTCGGGA GAAGAAATGG CTCAACTCTT CCCCGAATAT
CCTGAAGCAA TTTTAAACAC CGTCCGTATT GCAGAAATGT GCAATTTGGA AATTCCTCAA
CCCGGCCCCA TTCTTCCGAT ATACAAAATC CCTGAAGATT TTAGCTCAAA GGAAGACTAT
ATCAGGCATC TTGCTGAGGA AGGCTTAAAA AAGCGTTATC CCGTCATTAC CGATGAAATA
AAGAATAGGC TTAACTATGA GCTCGATATA GTTATAAAAA TGGACTTTGT CGGCTATTTT
TTAATTGTGT GGGATTTTAT AAACTGGGCA AAAAATAACG GAGTTCCCGT AGGCCCTGGG
CGCGGTTCCG GAGCAGGCTC AATCCTTGCA TACTCTTTGA GGATTACCGA CATAGACCCC
CTAAAGTACA ACCTCCTTTT TGAGCGCTTT TTAAATCCCG AAAGGGTTTC GATGCCCGAC
TTCGACGTAG ACTTTTGCTT CGAAAGGCGG CAGGAGGTAA TAGAGTATGT GCGTCAAAAA
TATGGGGACG AAAATGTCGG TCAAATCATC ACCTTCGGAA CCTTAAAGCC CAAGGCTGTC
GTAAAAGATG TGGGCCGGGT TTTAAATATT CCGCTTGCCG ATGTAAACGC CATTACAAAA
CTCATACCTC CCAAACCTTT AACGGACGGT ATAAAAGAGG TTACATTAAA ATACGCTGTT
GATGTAGTTC CAGAATTAAA AGAAATGGCC GAAGACTCCC AATACAAAGA GCTTTTTGAA
ATAAGCATAG CTCTTGAGGG CCGAAACCGT AATTCCAGTC TTCATGCTGC GGGCATCGTT
ATAGGTAAGA CAGCCTTAAC CGACTATGTT CCGCTTTACA AGGATTCAAA AACCGGAAAG
GTCGCAACTC AATTTACAAT GGACTTAATC GAAAACTGCG GCCTTGTAAA GATGGACTTT
TTAGGCCTAA AAACCTTAAC CCTTATAAAA CATACCGAAG ACCTAATCCA TAAGAGGGGA
GGGGAATGGA GAAAATTTTC TATAGGCGAT ATTGATTATT CGGATGCTGA AACGTTTAAA
ATGCTTAGTG AAGGTAAAGC TGCTGCAGTC TTCCAGTTTG AAAGTCAGGG AATGCAAAAT
ATTTTAAAGC GTGCAAAGCC CTCCAAAATG GAAGATCTGA TTGCTTTAAA TGCCTTGTAC
CGTCCGGGGC CTATGGATTA TATCAACCAG TTTATCGAGT CAAAATTCGA TAATTCCAAA
ATCAAATATC CCGACCCCTG CCTTGAAGAT ATACTTTCCG AAACCTATGG AGTTATCGTT
TATCAGGAAC AGGTTATGCA GGTTGCCCAA AGAATAGCGG GCTACTCTTT AGGTCAGGCC
GATATACTCC GCCGTGCTAT GGGAAAGAAA AAAATCGAGG TTATGAAAAC CGAAAAAGAA
AAGTTTATTA AGGGTGCACA AGAAAAGGGA TTCAGCAGGG AAGACGCCGA TAGAATCTTT
GAGATTCTTA TCCCCTTTGC AGGCTACGGT TTTAACAAGA GTCACGCAGC AGCCTATTCG
GTTTTAGCCT TTCAGACCGC CTACCTGAAA GCTCATTTTC CGGCAGAATT TATGGCGGCT
AACCTTACCA ACGAAATTAC CTCTACCGAC AAACTTCCAG AATATATTGC AGAAGCCGAA
AAGATGGGTC TTAAAATTCT ACCGCCCCAT GTAAATTTAT CCGATCCGTA TTTTAGCGTT
TCCTCCGATG GAAATATTAT TTTCGGCCTT TTGGGAATTA AGGGGGTCGG AATGCAGGCG
GCTCACGAAC TTGTAGAAGA ACGCGAAAAG AACGGCAGGT ACAAGTCCTT TATCGACTTT
TTGGAAAGGA ATGATTTGCA TACTCAAAAC AAGCGGAACC TTGAGGTTAT GATTAAAACA
GGCTGTTTTG ACGGCTTAGG GCAGGAGCGT TCTACCTTGA TGGTAAACAT GGACGGGGCG
GTTGCTTACG CTTCCCAAAA AAAAGAAAAC GAAAGCACGG GGCAGGGAAG TCTTTTTGAA
GGCTCCGGTA TAAAAGAGTT TTCGGACTTT GTCTTTGAAA AAATCGAAGA GTTCCCCAAA
AAAGAAAAAC TGCGGCTCGA AAAAGAGCTG ATGGGCTTTT ATATTTCGGG ACACCCTTTG
GATGAGTACC GAAAGGTTAT AGATAATTCC GCTACCTTGG ATATTTCACA TCTTGCACGC
GCGACCTCAA AGAAGAGATA TGTTCTTGTC GGTATGCTTA CAGGAGTAAG GCAGCATCAA
ACAAAAAAAG GTGCGATGAT GGGCTTCGGA ACCTTTGAAG ACTTAAACGG AACATTGGAT
TTGGTTTTTT TTCCAAAGAC TTGGGAAAAA CATAGAGCTG TTCTTTTACC TGAAACCGTC
TGCGGCTTTG CCGGTTCTAT CGATAACAGT GACGGGGAGT CTCATTCCTT TTTGGTAGAT
GAAGTTTTGG AAATCGATAA ATTACAGCAA AAAGCTTTAA GCGAAGTTCA TATTGAACTT
GATGAAAATA TAACGTCGGC AAAAGAGTTG ACCGGCTTAA AAGACTTTTT ATATGAAAGG
TCAGGGAACT GCGAGGTTTA TATTCATGTA AAAGATGAGG ATAAGGCTTA TATAATTAAG
GCTTCTCCTC AAATTCGAAT TCCTTCAACT CCGGAATTTA TTGAAGAATT AAATATGCAG
TTCGGGGTTG AACAAATTTG GCTTGAATAG
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| Protein sequence | MAVDFVHLHV HSDFSLLDGA ASVKALAAKA EKLGQTALAL TDHGNMFGAI NFYNACKEKN
IKPIIGCEFY VAPESRFEKK ETPGGKKYYH LILLAKNETG YRNLMVLCSK GYTEGMYYKP
RIDDELLAQY AEGLICLSAC LAGELPVLLL NGEKEKAEAH VRKYREIFGA ENYFIELQDH
GLKEEKKASK LLIEMARKVG VPLVLTNDIH YVEQKDYVAQ DILMCIGMKK LRTDTNRMQF
EGSEFYFKSG EEMAQLFPEY PEAILNTVRI AEMCNLEIPQ PGPILPIYKI PEDFSSKEDY
IRHLAEEGLK KRYPVITDEI KNRLNYELDI VIKMDFVGYF LIVWDFINWA KNNGVPVGPG
RGSGAGSILA YSLRITDIDP LKYNLLFERF LNPERVSMPD FDVDFCFERR QEVIEYVRQK
YGDENVGQII TFGTLKPKAV VKDVGRVLNI PLADVNAITK LIPPKPLTDG IKEVTLKYAV
DVVPELKEMA EDSQYKELFE ISIALEGRNR NSSLHAAGIV IGKTALTDYV PLYKDSKTGK
VATQFTMDLI ENCGLVKMDF LGLKTLTLIK HTEDLIHKRG GEWRKFSIGD IDYSDAETFK
MLSEGKAAAV FQFESQGMQN ILKRAKPSKM EDLIALNALY RPGPMDYINQ FIESKFDNSK
IKYPDPCLED ILSETYGVIV YQEQVMQVAQ RIAGYSLGQA DILRRAMGKK KIEVMKTEKE
KFIKGAQEKG FSREDADRIF EILIPFAGYG FNKSHAAAYS VLAFQTAYLK AHFPAEFMAA
NLTNEITSTD KLPEYIAEAE KMGLKILPPH VNLSDPYFSV SSDGNIIFGL LGIKGVGMQA
AHELVEEREK NGRYKSFIDF LERNDLHTQN KRNLEVMIKT GCFDGLGQER STLMVNMDGA
VAYASQKKEN ESTGQGSLFE GSGIKEFSDF VFEKIEEFPK KEKLRLEKEL MGFYISGHPL
DEYRKVIDNS ATLDISHLAR ATSKKRYVLV GMLTGVRQHQ TKKGAMMGFG TFEDLNGTLD
LVFFPKTWEK HRAVLLPETV CGFAGSIDNS DGESHSFLVD EVLEIDKLQQ KALSEVHIEL
DENITSAKEL TGLKDFLYER SGNCEVYIHV KDEDKAYIIK ASPQIRIPST PEFIEELNMQ
FGVEQIWLE
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