| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2778 |
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| Symbol | |
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| ID | 2740745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2829461 |
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| End bp | 2829694 |
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| Gene Length | 234 bp |
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| Protein Length | 77 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637161676 |
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| Product | PspC domain-containing protein |
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| Protein accession | NP_973376 |
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| Protein GI | 42528278 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000150595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA GATTATGCAA ATCATCAAGG GATAAAAAAA TTTTAGGAGT TTGTGCAGGC
CTTGCCGAGT ATCTTGGTGT TGACCCTGTT TTGATAAGAC TCCTGTGGAT CATATTTGCC
TTAGTTGTGG GTTCAGGAAT CATTGCTTAC ATAATAGCGG CTATTATTAT GCCCTATGAT
ACGGAAGTTA AGGATGATGA TGATGAGTCT TATGAATATG CCCCTCGTGA TTGA
|
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| Protein sequence | MKKRLCKSSR DKKILGVCAG LAEYLGVDPV LIRLLWIIFA LVVGSGIIAY IIAAIIMPYD
TEVKDDDDES YEYAPRD
|
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| |