Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2776 |
Symbol | pip |
ID | 2740743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 2827504 |
End bp | 2828445 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637161674 |
Product | proline iminopeptidase |
Protein accession | NP_973374 |
Protein GI | 42528276 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00879626 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTT TATATGAAAA AACACCGCTT TTTGATGAAG GCTTTTTAAA GGTCTCGGAT ATTCACAGTA TTTATTATGC CCAATACGGA AATCCCAATG GGAAACCTGT AGTTTTTTTA CACGGAGGCC CCGGAGGCGG CTGCATTCCC GTTGCAAGCC AGTATTTTGA TCCCGAATTT TACCGAATAG TTTTATTCGA TCAGAGGGGA GCAGGAAAAA GTTTACCTCC TTGCGAGATG AAAGAAAACA AATCGGAAAA TCTAATTGAA GATATAGAGA AACTACGGAA ACATCTAAGT ATTAAAAAAT GGATGGTCTT CGGCGGAAGC TGGGGAAGCA CCCTCGCTCT AATCTATTCC ATAGCTCACC CCGATAAGGT TGTCTCTATA ATCCTACGAG GAATCTTTTT AGGAACGCAA GAAGAAATAG ATTGGATTTA CGAAGCAGGC GGAGCTTCCA AATTCTTCCC TGAAGATTTT GAAGCCTACC AAAATTTTAT TCCGCTGGAA GAAAGAAGCT CATTGGTAAG AGCTTATTCA AAACGCCTTT TTGGAGAGGA TAAAAAACTG TCCCTTGAAG CTGCCCATAA GTGGAGCCGT TGGGAATCGG CCCTCGTGCG TCTTTTCCCA ACTGTCTACG ATATGAGTGA TGAAGAAGCT CTTGCTATGG CCAAGGCCGA ATGTCATTAT TTTTTGCACA AGTGCTTTTT TAAGGATGAT AATTATATCC TAAACAACTG CAATAAAATT AAAGACCTCC CATGTACTAT TGTGCAAGGA AGATACGATA TGGACTGTCC GCCCTTCTCC GCTTATAAAC TGCATAAAAA ATTACCCAAA TCGAATTTGA ACATTGTCTT ATTCGGAGGA CACTCCAGCA TGGAACCGGG ACTGGTGGAC GGCCTTGTAA GAGCTGCAGA AGATCATAAA AAATTCTTTT AG
|
Protein sequence | MKILYEKTPL FDEGFLKVSD IHSIYYAQYG NPNGKPVVFL HGGPGGGCIP VASQYFDPEF YRIVLFDQRG AGKSLPPCEM KENKSENLIE DIEKLRKHLS IKKWMVFGGS WGSTLALIYS IAHPDKVVSI ILRGIFLGTQ EEIDWIYEAG GASKFFPEDF EAYQNFIPLE ERSSLVRAYS KRLFGEDKKL SLEAAHKWSR WESALVRLFP TVYDMSDEEA LAMAKAECHY FLHKCFFKDD NYILNNCNKI KDLPCTIVQG RYDMDCPPFS AYKLHKKLPK SNLNIVLFGG HSSMEPGLVD GLVRAAEDHK KFF
|
| |