Gene TDE2776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2776 
Symbolpip 
ID2740743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2827504 
End bp2828445 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content41% 
IMG OID637161674 
Productproline iminopeptidase 
Protein accessionNP_973374 
Protein GI42528276 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR01249] proline iminopeptidase, Neisseria-type subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00879626 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT TATATGAAAA AACACCGCTT TTTGATGAAG GCTTTTTAAA GGTCTCGGAT 
ATTCACAGTA TTTATTATGC CCAATACGGA AATCCCAATG GGAAACCTGT AGTTTTTTTA
CACGGAGGCC CCGGAGGCGG CTGCATTCCC GTTGCAAGCC AGTATTTTGA TCCCGAATTT
TACCGAATAG TTTTATTCGA TCAGAGGGGA GCAGGAAAAA GTTTACCTCC TTGCGAGATG
AAAGAAAACA AATCGGAAAA TCTAATTGAA GATATAGAGA AACTACGGAA ACATCTAAGT
ATTAAAAAAT GGATGGTCTT CGGCGGAAGC TGGGGAAGCA CCCTCGCTCT AATCTATTCC
ATAGCTCACC CCGATAAGGT TGTCTCTATA ATCCTACGAG GAATCTTTTT AGGAACGCAA
GAAGAAATAG ATTGGATTTA CGAAGCAGGC GGAGCTTCCA AATTCTTCCC TGAAGATTTT
GAAGCCTACC AAAATTTTAT TCCGCTGGAA GAAAGAAGCT CATTGGTAAG AGCTTATTCA
AAACGCCTTT TTGGAGAGGA TAAAAAACTG TCCCTTGAAG CTGCCCATAA GTGGAGCCGT
TGGGAATCGG CCCTCGTGCG TCTTTTCCCA ACTGTCTACG ATATGAGTGA TGAAGAAGCT
CTTGCTATGG CCAAGGCCGA ATGTCATTAT TTTTTGCACA AGTGCTTTTT TAAGGATGAT
AATTATATCC TAAACAACTG CAATAAAATT AAAGACCTCC CATGTACTAT TGTGCAAGGA
AGATACGATA TGGACTGTCC GCCCTTCTCC GCTTATAAAC TGCATAAAAA ATTACCCAAA
TCGAATTTGA ACATTGTCTT ATTCGGAGGA CACTCCAGCA TGGAACCGGG ACTGGTGGAC
GGCCTTGTAA GAGCTGCAGA AGATCATAAA AAATTCTTTT AG
 
Protein sequence
MKILYEKTPL FDEGFLKVSD IHSIYYAQYG NPNGKPVVFL HGGPGGGCIP VASQYFDPEF 
YRIVLFDQRG AGKSLPPCEM KENKSENLIE DIEKLRKHLS IKKWMVFGGS WGSTLALIYS
IAHPDKVVSI ILRGIFLGTQ EEIDWIYEAG GASKFFPEDF EAYQNFIPLE ERSSLVRAYS
KRLFGEDKKL SLEAAHKWSR WESALVRLFP TVYDMSDEEA LAMAKAECHY FLHKCFFKDD
NYILNNCNKI KDLPCTIVQG RYDMDCPPFS AYKLHKKLPK SNLNIVLFGG HSSMEPGLVD
GLVRAAEDHK KFF