Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2762 |
Symbol | fliY |
ID | 2740729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2816653 |
End bp | 2817834 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637161660 |
Product | flagellar motor switch protein FliY |
Protein accession | NP_973360 |
Protein GI | 42528262 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATG GTTCAATTTC TCAAGATGAA ATAGATGCTT TGTTATCGGG AGTAGGAGGA GGCGGAATTG CATCGGCTCC TGCTGCAGGT GCAGGCGATG ATTTGGCCGG TTTTAAAAAA ACAGCCTTAC TTCAATTTAC AAAAGAAAAC ATCCCCGGGC TGTCTTCGAA CTTGGAGTCC ATGACGGGTA AAAGTGTCAG CATTTCCGAG CCGGTTATCG AGTTTTCCGA TAGAGAGTCC TTTTTACGAA AAGTATCCGA AATGACTGTT GCCACCCTCA TTGATTTTTC GGGATCTATG AGCGGTGATC ATGCCTTTAT GATGAGTCCT GAACTTGCAA AGAAAATAGT CAGTTTGGTA AATCATGAAG ACAACGTAGA AATAGACGAT ATGGCCCTTT CTGTTATAAG TGAGACAATC GCTCAATATG TGGGTACGGA ACTTAGTTAC CTTGAGCGTG CCGGACTTAC CGGTGTTGCA TCTTCTCCGG CAGAATCTTC ACATGTTCCT AAGGCTATGA TGAGACTACC TCAGCGTAAC TTTGTAAGCA TAACTTATAA TGTTAAGCTT GATGATTCTG CATATCAACT GTGGGAAATT CTTTCTGAAG ATGTTGTCGA TAAAATAGCT TCTACGATTG CGGGTCCTGA TCCTTCAATG CAGGGTATGG CTGCAATGGG AGGTATGCAG AATATGGGTG CAATGCAAAA CAATGGAATG ATGGGCGGTA TGCAGATGGG AGCTACGCAA ACAGGCGGCC CCGCACAGCA AATGTTCGGT TCAGGTATGC CCCAAGGATC GCCTCAGCAA GGAGGAAATA TGCAGGCTAT GAATAATATG GGCATGATGC CCCAAATGGG AATGGGCGCC AGTGTTCAGC CTGTTCAATT TCCGCCCCTT CAGGGTTTTG TAAGTCAGGA GGAGCAGGGT AATATCGGTC TTATCATGGA CGTTTACATG GAAATGACCG TAGAACTAGG ACGAACAAAG CGCATGATTA AGGAAATTCT TGGAATGGGC GAGGGTCATA TTATTGAGCT TGATAAGCTT GCCGGTGAAC CTGTAGATGT TCTTGTAAAC CACAAACCTA TAGCTAAGGG AGAGGTTGTA GTTATAGAAG AAAGTTTCGG TGTCCGTATA ACCGAAATTT TATCTCCGGC TGAGCGTATT TCGGATATAT AA
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Protein sequence | MSDGSISQDE IDALLSGVGG GGIASAPAAG AGDDLAGFKK TALLQFTKEN IPGLSSNLES MTGKSVSISE PVIEFSDRES FLRKVSEMTV ATLIDFSGSM SGDHAFMMSP ELAKKIVSLV NHEDNVEIDD MALSVISETI AQYVGTELSY LERAGLTGVA SSPAESSHVP KAMMRLPQRN FVSITYNVKL DDSAYQLWEI LSEDVVDKIA STIAGPDPSM QGMAAMGGMQ NMGAMQNNGM MGGMQMGATQ TGGPAQQMFG SGMPQGSPQQ GGNMQAMNNM GMMPQMGMGA SVQPVQFPPL QGFVSQEEQG NIGLIMDVYM EMTVELGRTK RMIKEILGMG EGHIIELDKL AGEPVDVLVN HKPIAKGEVV VIEESFGVRI TEILSPAERI SDI
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