Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2746 |
Symbol | hsdM-2 |
ID | 2740713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2800783 |
End bp | 2802225 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637161643 |
Product | type I restriction-modification system, M subunit |
Protein accession | NP_973344 |
Protein GI | 42528246 |
COG category | [V] Defense mechanisms |
COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.453882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA AAGAAGCAAC ACAAGCAAAA CCGGAACAGG CTCTTACGAA AAAAGTTTGG AACATGGCAG ACGTTCTTGC GGCAGCCGGT ATCGGATTTA CTGATTATAT TATTCAGCTG ACATATCTCT TATTTCTAAA AATGGATTTT GAAAAAGAAT CATACGGTTT AGGCAGTGCA CTTCCTGACG GAAGTAAGTG GAAAGATATC GTTCAACTGG ATGGGCCAGA TCAGCTTGCA AAATATGAAA AGATTCTGGA AGTTTTACAG GCAGCAGACG GACTTATCGG CGCAATTTTT ACGGAAGCGC AAAATAAAAT TGCAAAACCG GCACTTCTTA AAAAACTGAT CGGAATGATT GATGAAGAAA ACTGGTTCAG TATGGACGGA GACCTAAAAG GCGCAATTTA CGAAAGTATT CTTGAAAAAA ACGGACAGGA TAAAAAGTCA GGAGCAGGGC AGTACTTTAC GCCGCGCCCC TTGATTAATG CTATGGTTGA TGTTGTTCAG CCGAAAATTA CGGAGACCGT TGCCGACCCG GCATGCGGAA CCGGAGGATT CTTGCTTTCT GCGTATGACT ATATGCGTAA ACAAAGCGAC GAACAGAGTA AAGTGGAGTT CTTACAAACG AAGGCTCTTA GGGGAAATGA CATTACGCCT CTTGTCGTAA CGTTGGCTTC TATGAATCTT TATCTTCACG ATATTGGAGT GGACACCACG CCGATTAAAT GTGAAGATAG TTTGGAACAC GAACCCGAAC ATCTTGTAGA TGTAATTCTT GCAAATCCGC CTTTCGGTGC TCGGCCTGCA GGAAGCGTCG ATATTTCGAC CATGCGTTCC GATTTGATTG TAACGACAAG CAACAACCAG TTAAATTTTT TACAGCACAT GATGGTCATG TTAAAGGATG GCGGAAGAGC CGGAATAGTT CTTCCCGATA ATGTGCTTTT TGCAGATGGT GCCGGAGAAA TTCTCCGCAA AAAACTTCTA AAAGATTTTA ATCTTCATAC GATTCTTCGT CTGCCGACCG GTATTTTCTA TGCAAACGGC GTAAAAGCAA ATGTACTGTT CTTTGAAAAA GGAAGCCCGA CACAAGAGAC ATGGTATTAC GATTACCGGA CAGGGATTAA ACACACACTT GCAACGAAAC CGCTTAAACG TTCCGACCTT GAAGACTTTG TAAGCTGCTA CTGTGCAGGA CATGTTGAAG ACCGCAAAGA AACATGGTCG CCCGAAAATC CGAACGGCAG ATGGCGTAAA TATCATGTCG ATGAACTGCT TGCACGGGAT AAAACCGGTC TGGATATTTC TTGGATAAAA GACGGTTCCG ATACAGTGGA CTGTTCACTC GCCGAGCTTA TGCAAACCAT TCAAACCAAA AGCGCAAACA TTGCCGCAGC GGTTACCGAA CTTTCCAAAC TGATTGAAGG AATTGAAGAA TGA
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Protein sequence | MAKKEATQAK PEQALTKKVW NMADVLAAAG IGFTDYIIQL TYLLFLKMDF EKESYGLGSA LPDGSKWKDI VQLDGPDQLA KYEKILEVLQ AADGLIGAIF TEAQNKIAKP ALLKKLIGMI DEENWFSMDG DLKGAIYESI LEKNGQDKKS GAGQYFTPRP LINAMVDVVQ PKITETVADP ACGTGGFLLS AYDYMRKQSD EQSKVEFLQT KALRGNDITP LVVTLASMNL YLHDIGVDTT PIKCEDSLEH EPEHLVDVIL ANPPFGARPA GSVDISTMRS DLIVTTSNNQ LNFLQHMMVM LKDGGRAGIV LPDNVLFADG AGEILRKKLL KDFNLHTILR LPTGIFYANG VKANVLFFEK GSPTQETWYY DYRTGIKHTL ATKPLKRSDL EDFVSCYCAG HVEDRKETWS PENPNGRWRK YHVDELLARD KTGLDISWIK DGSDTVDCSL AELMQTIQTK SANIAAAVTE LSKLIEGIEE
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