Gene TDE2746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2746 
SymbolhsdM-2 
ID2740713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2800783 
End bp2802225 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content43% 
IMG OID637161643 
Producttype I restriction-modification system, M subunit 
Protein accessionNP_973344 
Protein GI42528246 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.453882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAA AAGAAGCAAC ACAAGCAAAA CCGGAACAGG CTCTTACGAA AAAAGTTTGG 
AACATGGCAG ACGTTCTTGC GGCAGCCGGT ATCGGATTTA CTGATTATAT TATTCAGCTG
ACATATCTCT TATTTCTAAA AATGGATTTT GAAAAAGAAT CATACGGTTT AGGCAGTGCA
CTTCCTGACG GAAGTAAGTG GAAAGATATC GTTCAACTGG ATGGGCCAGA TCAGCTTGCA
AAATATGAAA AGATTCTGGA AGTTTTACAG GCAGCAGACG GACTTATCGG CGCAATTTTT
ACGGAAGCGC AAAATAAAAT TGCAAAACCG GCACTTCTTA AAAAACTGAT CGGAATGATT
GATGAAGAAA ACTGGTTCAG TATGGACGGA GACCTAAAAG GCGCAATTTA CGAAAGTATT
CTTGAAAAAA ACGGACAGGA TAAAAAGTCA GGAGCAGGGC AGTACTTTAC GCCGCGCCCC
TTGATTAATG CTATGGTTGA TGTTGTTCAG CCGAAAATTA CGGAGACCGT TGCCGACCCG
GCATGCGGAA CCGGAGGATT CTTGCTTTCT GCGTATGACT ATATGCGTAA ACAAAGCGAC
GAACAGAGTA AAGTGGAGTT CTTACAAACG AAGGCTCTTA GGGGAAATGA CATTACGCCT
CTTGTCGTAA CGTTGGCTTC TATGAATCTT TATCTTCACG ATATTGGAGT GGACACCACG
CCGATTAAAT GTGAAGATAG TTTGGAACAC GAACCCGAAC ATCTTGTAGA TGTAATTCTT
GCAAATCCGC CTTTCGGTGC TCGGCCTGCA GGAAGCGTCG ATATTTCGAC CATGCGTTCC
GATTTGATTG TAACGACAAG CAACAACCAG TTAAATTTTT TACAGCACAT GATGGTCATG
TTAAAGGATG GCGGAAGAGC CGGAATAGTT CTTCCCGATA ATGTGCTTTT TGCAGATGGT
GCCGGAGAAA TTCTCCGCAA AAAACTTCTA AAAGATTTTA ATCTTCATAC GATTCTTCGT
CTGCCGACCG GTATTTTCTA TGCAAACGGC GTAAAAGCAA ATGTACTGTT CTTTGAAAAA
GGAAGCCCGA CACAAGAGAC ATGGTATTAC GATTACCGGA CAGGGATTAA ACACACACTT
GCAACGAAAC CGCTTAAACG TTCCGACCTT GAAGACTTTG TAAGCTGCTA CTGTGCAGGA
CATGTTGAAG ACCGCAAAGA AACATGGTCG CCCGAAAATC CGAACGGCAG ATGGCGTAAA
TATCATGTCG ATGAACTGCT TGCACGGGAT AAAACCGGTC TGGATATTTC TTGGATAAAA
GACGGTTCCG ATACAGTGGA CTGTTCACTC GCCGAGCTTA TGCAAACCAT TCAAACCAAA
AGCGCAAACA TTGCCGCAGC GGTTACCGAA CTTTCCAAAC TGATTGAAGG AATTGAAGAA
TGA
 
Protein sequence
MAKKEATQAK PEQALTKKVW NMADVLAAAG IGFTDYIIQL TYLLFLKMDF EKESYGLGSA 
LPDGSKWKDI VQLDGPDQLA KYEKILEVLQ AADGLIGAIF TEAQNKIAKP ALLKKLIGMI
DEENWFSMDG DLKGAIYESI LEKNGQDKKS GAGQYFTPRP LINAMVDVVQ PKITETVADP
ACGTGGFLLS AYDYMRKQSD EQSKVEFLQT KALRGNDITP LVVTLASMNL YLHDIGVDTT
PIKCEDSLEH EPEHLVDVIL ANPPFGARPA GSVDISTMRS DLIVTTSNNQ LNFLQHMMVM
LKDGGRAGIV LPDNVLFADG AGEILRKKLL KDFNLHTILR LPTGIFYANG VKANVLFFEK
GSPTQETWYY DYRTGIKHTL ATKPLKRSDL EDFVSCYCAG HVEDRKETWS PENPNGRWRK
YHVDELLARD KTGLDISWIK DGSDTVDCSL AELMQTIQTK SANIAAAVTE LSKLIEGIEE