Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2721 |
Symbol | |
ID | 2740940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2777923 |
End bp | 2779695 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637161618 |
Product | helicase domain-containing protein |
Protein accession | NP_973319 |
Protein GI | 42528221 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAGAAT CTAAACCGCT TATAATTCAA GGAGACCGCT CCATTCTTTT GGATATTCAC GACCCGGAAG CCAATGAGGC TCGTTTTGCC CTTATTCCTT TTGCGGAGCT TGAAAAGTCG CCTGAACATC TCCATACTTA CAGGCTGACC CCCCTCTCGC TCTGGAATGC GGCAGGTGTC GGGCTTTCAG CCGATTCTAT TATGAAAACC CTCACAGGCT TTTCCCGCTT TAAGGTTCCC GATTCTATCT TGGTTTGGAT GAAAGAGACG ATGGGCCGCT ACGGTAAAAT AAAGCTCCTC CCCCTTGAAA AGCCTCAAGA AGAAAAAAAT GGAGCTGAGG AGAAGACCGA TGTTGAAGAA AGCGGCGAAA ATCAAGCTGA TGGAATAAGG CACGAAACTC CCGATGCGGA ATTTTTGCGC CTTAAACCTG AAAATGCTCT TATCTTTAAG GAATTAAAAA GCAGCAAGAT TCTTTTAAAA TATTTAATAG AAGATCCCGA TGAGGAAAAT TCTTTTTTGA TTTCCCTTTT AAACAGGGGA ACTGTAAAGC AGGCTCTTTT AAAACAGGGC TGGCCCGTGC AGGATGAGGT TCCCCTCCGT GACGGAGAGC CCTTGGATAT TTCCCTAAAA GAAAAGACTT CAAGCGGTGC CGAATTTGAA ATAAGAGATT ATCAGCGGGA TGCGGCCTCT TCCTTTGTCG GTGATAAGTC GGCAGGAACC GGCTTCGGCA CAATTGTTCT TCCCTGCGGC TCGGGAAAAA CCATAGTCGG AATGCTTACG ATGAGCCTTC TTAAAACAAG CACCCTTATT CTAACTCCCA ATGTTGCTGC CGTTTATCAG TGGAGACGGG AACTTTTGGA TAAGACAAAC ATAAAAGATG AGGATATAGG CTTATATACG GGCGAGGTAA AGGAAATAAG GCCTGTTACG ATAGCGACTT ATCAGGTGCT TACTTGGAGG CCCAACACCG ATGCGGCCTT CCCTCATTTT AAGATTTTTA GAGAGAGGGC TTGGGGGCTT ATCATCTACG ATGAGGTTCA CCTATTACCG GCTCCGGTTT TTAGAATTAC GGCAGAGCTT CAAGTTATAA GAAGACTCGG GCTTACTGCG ACCCTTGTGA GAGAGGACGG CTGTGAGGGC GATGTTTTCA GCCTTGTCGG CCCTAAGCGG TTCGATGTGC CCTGGAAGGA CCTTGAACAA AAGGGCTGGA TAGCAAAAGC TTATTGTACC GAAATCAGGG TAAACATTGC TCCTTCAAAA GAGATAGAAT ACGCAGTGGG TACCACTCGC GAAAAGCACC GCATTGCAAG CGAGAACCCT GCAAAGCTCG AAATAGTAAA AAAACTTTTG ACCAAGCACA AGGAAAATCA AATTCTTATA ATCGGGCAAT ACTTGTCCCA GCTAGAAGCG ATTGCAAAAG AAATAAATGC TCCTCTGATC ACGGGGAAAA ATACAAATGC CGAGCGGGAG CTTTTGTATG ATTCATTTAG AAAGGGAGAG ATAAACGTTT TGGTGGTTTC TAAGGTTGCA AACTTTGCGA TTGATCTGCC TGATGCTTCG GTAGCTATTC AGGTTTCGGG CGTTTTCGGC AGCCGGCAAG AAGAGGCTCA GCGTTTGGGC CGAATCTTGA GGCCTAAAGA ATGTGATTCC CATTTTTACA GCATTGTAAC CCGCCAAACT ATAGAAGAGG GCTTCGCCGA AAAGCGTCAA AAATTTTTAG CAGAGCAGGG TTATGACTAC TCGATTCTTA CCGAAGCCGA ATTGGATAAA TAA
|
Protein sequence | MQESKPLIIQ GDRSILLDIH DPEANEARFA LIPFAELEKS PEHLHTYRLT PLSLWNAAGV GLSADSIMKT LTGFSRFKVP DSILVWMKET MGRYGKIKLL PLEKPQEEKN GAEEKTDVEE SGENQADGIR HETPDAEFLR LKPENALIFK ELKSSKILLK YLIEDPDEEN SFLISLLNRG TVKQALLKQG WPVQDEVPLR DGEPLDISLK EKTSSGAEFE IRDYQRDAAS SFVGDKSAGT GFGTIVLPCG SGKTIVGMLT MSLLKTSTLI LTPNVAAVYQ WRRELLDKTN IKDEDIGLYT GEVKEIRPVT IATYQVLTWR PNTDAAFPHF KIFRERAWGL IIYDEVHLLP APVFRITAEL QVIRRLGLTA TLVREDGCEG DVFSLVGPKR FDVPWKDLEQ KGWIAKAYCT EIRVNIAPSK EIEYAVGTTR EKHRIASENP AKLEIVKKLL TKHKENQILI IGQYLSQLEA IAKEINAPLI TGKNTNAERE LLYDSFRKGE INVLVVSKVA NFAIDLPDAS VAIQVSGVFG SRQEEAQRLG RILRPKECDS HFYSIVTRQT IEEGFAEKRQ KFLAEQGYDY SILTEAELDK
|
| |