Gene TDE2721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2721 
Symbol 
ID2740940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2777923 
End bp2779695 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content46% 
IMG OID637161618 
Producthelicase domain-containing protein 
Protein accessionNP_973319 
Protein GI42528221 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAAT CTAAACCGCT TATAATTCAA GGAGACCGCT CCATTCTTTT GGATATTCAC 
GACCCGGAAG CCAATGAGGC TCGTTTTGCC CTTATTCCTT TTGCGGAGCT TGAAAAGTCG
CCTGAACATC TCCATACTTA CAGGCTGACC CCCCTCTCGC TCTGGAATGC GGCAGGTGTC
GGGCTTTCAG CCGATTCTAT TATGAAAACC CTCACAGGCT TTTCCCGCTT TAAGGTTCCC
GATTCTATCT TGGTTTGGAT GAAAGAGACG ATGGGCCGCT ACGGTAAAAT AAAGCTCCTC
CCCCTTGAAA AGCCTCAAGA AGAAAAAAAT GGAGCTGAGG AGAAGACCGA TGTTGAAGAA
AGCGGCGAAA ATCAAGCTGA TGGAATAAGG CACGAAACTC CCGATGCGGA ATTTTTGCGC
CTTAAACCTG AAAATGCTCT TATCTTTAAG GAATTAAAAA GCAGCAAGAT TCTTTTAAAA
TATTTAATAG AAGATCCCGA TGAGGAAAAT TCTTTTTTGA TTTCCCTTTT AAACAGGGGA
ACTGTAAAGC AGGCTCTTTT AAAACAGGGC TGGCCCGTGC AGGATGAGGT TCCCCTCCGT
GACGGAGAGC CCTTGGATAT TTCCCTAAAA GAAAAGACTT CAAGCGGTGC CGAATTTGAA
ATAAGAGATT ATCAGCGGGA TGCGGCCTCT TCCTTTGTCG GTGATAAGTC GGCAGGAACC
GGCTTCGGCA CAATTGTTCT TCCCTGCGGC TCGGGAAAAA CCATAGTCGG AATGCTTACG
ATGAGCCTTC TTAAAACAAG CACCCTTATT CTAACTCCCA ATGTTGCTGC CGTTTATCAG
TGGAGACGGG AACTTTTGGA TAAGACAAAC ATAAAAGATG AGGATATAGG CTTATATACG
GGCGAGGTAA AGGAAATAAG GCCTGTTACG ATAGCGACTT ATCAGGTGCT TACTTGGAGG
CCCAACACCG ATGCGGCCTT CCCTCATTTT AAGATTTTTA GAGAGAGGGC TTGGGGGCTT
ATCATCTACG ATGAGGTTCA CCTATTACCG GCTCCGGTTT TTAGAATTAC GGCAGAGCTT
CAAGTTATAA GAAGACTCGG GCTTACTGCG ACCCTTGTGA GAGAGGACGG CTGTGAGGGC
GATGTTTTCA GCCTTGTCGG CCCTAAGCGG TTCGATGTGC CCTGGAAGGA CCTTGAACAA
AAGGGCTGGA TAGCAAAAGC TTATTGTACC GAAATCAGGG TAAACATTGC TCCTTCAAAA
GAGATAGAAT ACGCAGTGGG TACCACTCGC GAAAAGCACC GCATTGCAAG CGAGAACCCT
GCAAAGCTCG AAATAGTAAA AAAACTTTTG ACCAAGCACA AGGAAAATCA AATTCTTATA
ATCGGGCAAT ACTTGTCCCA GCTAGAAGCG ATTGCAAAAG AAATAAATGC TCCTCTGATC
ACGGGGAAAA ATACAAATGC CGAGCGGGAG CTTTTGTATG ATTCATTTAG AAAGGGAGAG
ATAAACGTTT TGGTGGTTTC TAAGGTTGCA AACTTTGCGA TTGATCTGCC TGATGCTTCG
GTAGCTATTC AGGTTTCGGG CGTTTTCGGC AGCCGGCAAG AAGAGGCTCA GCGTTTGGGC
CGAATCTTGA GGCCTAAAGA ATGTGATTCC CATTTTTACA GCATTGTAAC CCGCCAAACT
ATAGAAGAGG GCTTCGCCGA AAAGCGTCAA AAATTTTTAG CAGAGCAGGG TTATGACTAC
TCGATTCTTA CCGAAGCCGA ATTGGATAAA TAA
 
Protein sequence
MQESKPLIIQ GDRSILLDIH DPEANEARFA LIPFAELEKS PEHLHTYRLT PLSLWNAAGV 
GLSADSIMKT LTGFSRFKVP DSILVWMKET MGRYGKIKLL PLEKPQEEKN GAEEKTDVEE
SGENQADGIR HETPDAEFLR LKPENALIFK ELKSSKILLK YLIEDPDEEN SFLISLLNRG
TVKQALLKQG WPVQDEVPLR DGEPLDISLK EKTSSGAEFE IRDYQRDAAS SFVGDKSAGT
GFGTIVLPCG SGKTIVGMLT MSLLKTSTLI LTPNVAAVYQ WRRELLDKTN IKDEDIGLYT
GEVKEIRPVT IATYQVLTWR PNTDAAFPHF KIFRERAWGL IIYDEVHLLP APVFRITAEL
QVIRRLGLTA TLVREDGCEG DVFSLVGPKR FDVPWKDLEQ KGWIAKAYCT EIRVNIAPSK
EIEYAVGTTR EKHRIASENP AKLEIVKKLL TKHKENQILI IGQYLSQLEA IAKEINAPLI
TGKNTNAERE LLYDSFRKGE INVLVVSKVA NFAIDLPDAS VAIQVSGVFG SRQEEAQRLG
RILRPKECDS HFYSIVTRQT IEEGFAEKRQ KFLAEQGYDY SILTEAELDK