Gene TDE2706 details

Gene Information

• Locus tag: TDE2706
• ID: 2739293
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 2752006
• End bp: 2753883
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637161603
• Product: hypothetical protein
• Protein accession: NP_973304
• Protein GI: 42528206
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2211] Na+/melibiose symporter and related transporters

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTTGGC GGACTTACCT CGCCTACGGA GCTGCCGATT TATACGGCGG AGGCTGTTTT 
TTTATCGTTA CTACATTTGC AATGTACTAT TTGGTAAATG TAATAGGGCT TCATCCTGTT 
TTGGCCGGGC TTATACCTGC AATCGGAAAG TTTTGGGATG CCGTATCGGA TCCTATGATG 
GGTTACATTG CCGATAATAC TCCGCAAAAC CGTTTTGGGA AAAGAAGAGT CTGGTTTTTG 
GTTTCAATTA TTCCAATCGC TCTTTCCTTT ATCATAATTT GGGTTCCGAC CGGAATCGAA 
AGTCAGGCCG GAAAATTCAT TTTTTATACG GTAGCCTATA TTATATTTTT TACCGTTTCG 
ACCGTTTCAT ACATACCCTA TGCGGCCCTT TCAGCCGAGA TAACTAAGGA TTTTTCCGAA 
AGGAATAAAC TTAACGGTTC CCGCCTTATG TTTTCTTTTA TAGCCACCCT TTTGGGAGGG 
CTTTTGGCTC AACCCATTAT CGATGCTTTT CACGGCAGTA TGATGGGCTA CTTTGTGATG 
AGCATAGTCT TTGCCCTTAT CTTCGCTCTT CCATGGATTC CTCTTTATTT TGAAACATGG 
GAATTGCCGG AAGAAAAGAG TCAAAAAAAA TCGGACGCTA AATTTATAAA AAACTTTTTA 
TCCCTTTTTA AAAGCAGGTC TTGCAGAATT CATATTGCTA TGTATGTCTG CTCCTACGGA 
GCTTTGGATA TAGTTATGTC TTTGGTCTTG TTCTATATTG TGGATTATTT AAACCGCGGA 
AGTGTTTTTG TAATAGCCCA AGGCGCTCTC TTACTAACAA TGATGGCGAC CCTTCCCATT 
CATAACCGCA TAATAAACAA AAAAGGGCAT AAGCCCGTCT ATGTTGCTGC CCTAATCATC 
TTTGCCGTTT CCATAGTCCT TATGTCTTTC CATACGCCTC AAACAAATCC GGCATTTTTG 
ATATTGAACA TGGTGCTTAT GGGTATCGGA ATTTCGGCAA ACAATTTGAT TCCTCATCAG 
CTTCTTCCTT TTTTGGCCGA CATAGACAAA CTTATGAGCG GAGAAAACCG AGCCGGAACC 
TATTCGGCTG CGATGACTCT TACCCGAAAA CTTTTTTTAG GTTTGGTGAT AATGACCACA 
ATAGGCTTTG TTTTAAGCGG TATAGGTTAT AAAAACCCCG TACCTTCGGT GTTGACCCAA 
AAGCAATTTG AAGAAGCTCA AAACTTGGCT GTAAAAAATA ATGAAAACTT TGAAAATATA 
AATAAGTATT ATTCTCTGCG GGAAGACGGG AATTTCCATC TAAAATACAT GAGCCGAAGC 
ACTGATGAGA TTATTACTTC TGCCTATAAA AAAGCAAAGA AGAATCAACA TGCTAATCCT 
CTTTTTTCAT TCTTTGAAGG AAAAGATAAC TTTGCTGAGA TTCCTCAAGA TGTTTTTGAA 
AATTTACTTT CTTCTTTTGA TAAAAAAGAT TTTAATGAAA TCGATAAAAA ATTCCTGGTG 
GAATCTTCTT ATACAAAATC GGGAGAAGTT TATAAAAAAA TCGAGCCTCA GGATCTTTAT 
ACAAAAGATG ACCTTTATGA TTTGAAGGAG CTTTTGGATA AGATTGATTT TAAATATTCC 
GGTATAGGGC AGGTTCAAAA ACCGCAGCAA AAGGAGAGTA CTTTAAAGGG TGTAAAGATT 
TCCTTTATAA TAATGCCCTT GTTTATGATT CTTTTCGGCA TTTTTTTCGG CCTTAAATTT 
AATGTAAGTC CTGAAAATCA TAAAATTATT CTTGATGAAT TAAACAGGTT AGAAGCAGGC 
GGTAAAAAAG AAGATGCGGA CGAAAAAACT AAGAAGATTT GCGAGCTTTT AATAGGAGAA 
CCTTACGGCA GAACATAA 

 

Protein sequence

MTWRTYLAYG AADLYGGGCF FIVTTFAMYY LVNVIGLHPV LAGLIPAIGK FWDAVSDPMM 
GYIADNTPQN RFGKRRVWFL VSIIPIALSF IIIWVPTGIE SQAGKFIFYT VAYIIFFTVS 
TVSYIPYAAL SAEITKDFSE RNKLNGSRLM FSFIATLLGG LLAQPIIDAF HGSMMGYFVM 
SIVFALIFAL PWIPLYFETW ELPEEKSQKK SDAKFIKNFL SLFKSRSCRI HIAMYVCSYG 
ALDIVMSLVL FYIVDYLNRG SVFVIAQGAL LLTMMATLPI HNRIINKKGH KPVYVAALII 
FAVSIVLMSF HTPQTNPAFL ILNMVLMGIG ISANNLIPHQ LLPFLADIDK LMSGENRAGT 
YSAAMTLTRK LFLGLVIMTT IGFVLSGIGY KNPVPSVLTQ KQFEEAQNLA VKNNENFENI 
NKYYSLREDG NFHLKYMSRS TDEIITSAYK KAKKNQHANP LFSFFEGKDN FAEIPQDVFE 
NLLSSFDKKD FNEIDKKFLV ESSYTKSGEV YKKIEPQDLY TKDDLYDLKE LLDKIDFKYS 
GIGQVQKPQQ KESTLKGVKI SFIIMPLFMI LFGIFFGLKF NVSPENHKII LDELNRLEAG 
GKKEDADEKT KKICELLIGE PYGRT