| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2700 |
|---|
| Symbol | |
|---|
| ID | 2739287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 2744536 |
|---|
| End bp | 2745828 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637161597 |
|---|
| Product | CCS family citrate carrier protein |
|---|
| Protein accession | NP_973298 |
|---|
| Protein GI | 42528200 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3493] Na+/citrate symporter |
|---|
| TIGRFAM ID | [TIGR00783] citrate carrier protein, CCS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.545794 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAACG AAAAGAAAAA GTATGAGATT TTGGGTATGC CGCTCACACT ATTCGGCATT
ATTTCGGCAG TTGTAATTGC TGCCATATGG TGGAATAAGC TGCCCGGCGG AATGATAGGA
GCCCTTCTCT TGATGATGGT ACTTGGTGAA GTACTAAACA TTATCGGAGA TAACACTCCT
ATAGTAAAAA CATTCTTTGG AGGAGGGCCG ATCGTAATTA TCTTTGCATC CAGTGCCCTT
GCTTATTATA ATATTTTACC CGAAGGAATT TTAAAAAATA CTTCAACCTT TATGAAAAGC
GGAGGCTTTT TAGACTTTTA CATCGCAGCC CTTATCACAG GTTCTATCCT AGGAATGGAT
AGAAAGCTTT TAATAAAGGC TGCCATACGC TACTTCCCGT GTATTATAGG TTCGGTTGCA
GCAGCATTGG TTTTGGTTGC ACTAGGAGCT CCTATTTTTG GAATGAAGGC AACGGAAGCT
ATCGCTTATA TCGGTATTCC AATCATGGGC GGAGGAATGG GTGCCGGAGC TGTACCGATC
TCCCAAGTAT TTTCATCCGC ATTGAAAATT CCCACAGAGC AAATCTTATC TAAGCTTGTA
CCGGCAGTTG CCCTCGGTAA TGCTCTTGCA ATAGTGGCCG GAGGTGTACT TAATAAACTC
GGCAAGATTA AACCTTCTTG GACAGGAAAC GGACAACTTC TCGCAAGCGG AACCTTTGAA
GTTCCTAATG ATGAGGAACT TCAAAGACAT TTTTCCTTGC TGGAGTTTGG AATTGCTATC
GTTATTGCAA CAGCCTTCTT TACATGGGGA AATATAGTCT CTAACCTATT TAAACTTATC
GGTGTAAATA TTCACACCTA TGCTTGGATG ATTATAAGCG TTGCTGTTGT AAAGGCAGCA
AATATCTTAC CCAAAAACTT TGAAAATGCT TGCGCTCTTT GGTATAAATT TGTTGCAAAA
AACTTTACCG CAGCCCTCTT GGTAGGTATA GGCATTGCAT ATACAAATCT CGGCGATATT
ATCGGAGCAT TCAGCATTTC TTATGTTGTA CTTGTACTCT TGGTTGTAAT CGGTGCAGGA
CTCATAGGAA AACTTGTTGG CTTTTATCCG ATTGAAGCTG CTATCACTGC AGGTCTTTGT
ATGGCAAATA TGGGAGGAAC GGGAGACGTT GCCGTTCTTA CGGCTTCAAA GCGCATGGAA
CTCATGCCCT TTGCTCAAAT CTCATCCCGC TTGGGAGGAG CATTTATAAT CCTGCTTGCC
TCGTTCTTAG TTCCGCTGTT CTTTGGCGGC TAA
|
|---|
| Protein sequence | MVNEKKKYEI LGMPLTLFGI ISAVVIAAIW WNKLPGGMIG ALLLMMVLGE VLNIIGDNTP
IVKTFFGGGP IVIIFASSAL AYYNILPEGI LKNTSTFMKS GGFLDFYIAA LITGSILGMD
RKLLIKAAIR YFPCIIGSVA AALVLVALGA PIFGMKATEA IAYIGIPIMG GGMGAGAVPI
SQVFSSALKI PTEQILSKLV PAVALGNALA IVAGGVLNKL GKIKPSWTGN GQLLASGTFE
VPNDEELQRH FSLLEFGIAI VIATAFFTWG NIVSNLFKLI GVNIHTYAWM IISVAVVKAA
NILPKNFENA CALWYKFVAK NFTAALLVGI GIAYTNLGDI IGAFSISYVV LVLLVVIGAG
LIGKLVGFYP IEAAITAGLC MANMGGTGDV AVLTASKRME LMPFAQISSR LGGAFIILLA
SFLVPLFFGG
|
|---|
| |