| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2686 |
|---|
| Symbol | flhF |
|---|
| ID | 2739273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 2725875 |
|---|
| End bp | 2727215 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637161583 |
|---|
| Product | flagellar biosynthetic protein FlhF |
|---|
| Protein accession | NP_973284 |
|---|
| Protein GI | 42528186 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1419] Flagellar GTP-binding protein |
|---|
| TIGRFAM ID | [TIGR03499] flagellar biosynthetic protein FlhF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.303629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACAT TTGTCGAGGA AGCTTCAACA TACGAAAAGT GTATTCAAAA AATTCAAGAA
AAGTATGGGC CGAATATAAT GATTACCCGC CGCGAGGTAA AAAGAAATGA AGGCTTCCTT
AGTCTTTTTA ATAAAGAAAC GATAAGGTTG AGTTTTAATA TTCAAAATGA AGCCTTCGTT
CCCAAATTCT CAAACAATGA AGAAGAAGTT AAATCTAAGT CAGCTGTTGC TCCCATAAAA
CCTTATTCTC CGGCAAATCT TGCAGAAGAG CGTTTAAAAA TAATGAAACT GGCTGCGGCT
CAATCGGAAG AAATGGCCGA GAAGATGATG CCCTATATCG AAAAGCTTGA AAATCAAAGC
TCTTCTCCAA TAAAAACCGA TATTGAATCT AAGGAGTTTA AAAACCTTGC AGAAACCGTT
GAGAGGCTGG TAGAAGAAAT AAGGCTAAAG AACTCTCCTT CCCAGGAGCA TGAAAATATT
TCGAAAATTG CGGCTCTTTT GGAAGAAAAT GATTTTACCG CTAAATATAT CCGCTCCATA
AAAGAAAAGA TATCTAAAAA TTTAAGTTTA GCCGAATTAA ACGATTTTGA GCTTGTCCAA
AAAAAAGTTC TTGACTGGAT AGCTTCTTCC ATACAGATAA AACTTGAAGA AACAAACAAT
GACGATCCTT CTAAAAAGCA AAAACTTATT GCCTTGGTCG GGCCCACAGG TATAGGAAAG
ACTACAACTC TTGCAAAACT TGCTGCCTAT TATATTTTGG CTGTTTCTAA GCTTGAAAAG
CGCTCTCTTG ATGTGAGGGT AATAACTATC GATCAATACA GAATAGGTGC GGCCTTTCAA
ATAAAAAAAT ACTGCGAGCA CATGGGCATT CCGCTTATCA TAGCAACCGA TCCATTAGAT
TTACACAAAT ATCTCGATCT ATATAAGGAT TCTGCCGATA TTATATGTAT AGATACGACA
GGGCGAAGTC CGACCGATCC CGAAAAGATA CTTGAGATGC AAAAGTATTT CGATGAGATA
GAGCCGGGCC GGATTGAAAC CCATCTTGTA GTAAGTGCCG TAACTAAGGC TGCCGACATA
ATCGAAATAA TAAAACAATA TTCCGTTTTT AATTTTTCGA GCCTTATAAT TACAAAGCTT
GATGAAACGG CTCATGTTGG CAGTATTATC AGTGTATTGG ATGAATACAA GATTCCTGTC
GCCTATATAA CCGAAGGCCA AACAGTACCC AAGGATATAG CTAGGGCTTC CAAGCTTGTT
TTGTTAAGGA AACTTACAGG GTTCTCTTTG GATTATATCA ATGAAAATTT CAATGACGAA
ATTTCTATAG TATGGAGCTA A
|
|---|
| Protein sequence | METFVEEAST YEKCIQKIQE KYGPNIMITR REVKRNEGFL SLFNKETIRL SFNIQNEAFV
PKFSNNEEEV KSKSAVAPIK PYSPANLAEE RLKIMKLAAA QSEEMAEKMM PYIEKLENQS
SSPIKTDIES KEFKNLAETV ERLVEEIRLK NSPSQEHENI SKIAALLEEN DFTAKYIRSI
KEKISKNLSL AELNDFELVQ KKVLDWIASS IQIKLEETNN DDPSKKQKLI ALVGPTGIGK
TTTLAKLAAY YILAVSKLEK RSLDVRVITI DQYRIGAAFQ IKKYCEHMGI PLIIATDPLD
LHKYLDLYKD SADIICIDTT GRSPTDPEKI LEMQKYFDEI EPGRIETHLV VSAVTKAADI
IEIIKQYSVF NFSSLIITKL DETAHVGSII SVLDEYKIPV AYITEGQTVP KDIARASKLV
LLRKLTGFSL DYINENFNDE ISIVWS
|
|---|
| |