| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2683 |
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| Symbol | fliA |
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| ID | 2739270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2723457 |
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| End bp | 2724245 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637161580 |
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| Product | RNA polymerase sigma factor WhiG |
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| Protein accession | NP_973281 |
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| Protein GI | 42528183 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000338898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAATA CGGATTATGA AAATATACCT GAAGAAGAAC TTTGGGATAA ATACAAAAAA
ACCTCAGATC CTAAAATCAG AGAATATTTT ATTTTAAAGT ATGCTCCATT GGTAAAATAC
GTCGCCGGAA AAGTCGGTAT AGGAATGCCT ACAAATGTAG AATTTGACGA CTTAGTCGGT
TACGGCGTTT TCGGCCTTTT GGATGCTATA GAAAAATATG ATCTCGATAA AAACGTTAAA
TTTAATACCT ACGCCGTTAA TAGAATAAGG GGAGCTATCT TTGATGAGCT GAGATCTATA
GACTGGGTTC CCCGCTCGGT ACGTCAAAAA AGCCGCGAAA TTGAAGAAAC AATTGCCGAC
TTGGAAGCTC GTCTAGGCCG CTCTGCCTCA AACGAAGAGA TAGCCTATGC AATGGGCTTG
GATATTGAAG AGTATAACTC TCTACTGCTT AAAATATCTG CAACAAGCGT TATTTCTTTG
ACCGATTTAA GGTTTTCTAA TGATGATTCG GAAGAGTTTT CGGTAGGAGA CATAATTGAA
GCTCCTTCTT CTTTGAACCC TGATGTGATT GTAGAGCGTG AAGACATAAA GAGGGTAATA
GTTGAAGCTA TTAAAGAATT ACCTGATAGA GAGAAAAAAG TTTTAATTAT GTACTATTAT
GAGGATATGA CTCTTAGGGA AATAGGAGAA GTCCTTCATG TAACCGAGTC CAGAGTTTCT
CAGATACACA CAAGCGCAAA TATAAAATTG AGAGCTAAGC TTTCTAATGT TACAAAGGGC
ATAAAATAG
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| Protein sequence | MANTDYENIP EEELWDKYKK TSDPKIREYF ILKYAPLVKY VAGKVGIGMP TNVEFDDLVG
YGVFGLLDAI EKYDLDKNVK FNTYAVNRIR GAIFDELRSI DWVPRSVRQK SREIEETIAD
LEARLGRSAS NEEIAYAMGL DIEEYNSLLL KISATSVISL TDLRFSNDDS EEFSVGDIIE
APSSLNPDVI VEREDIKRVI VEAIKELPDR EKKVLIMYYY EDMTLREIGE VLHVTESRVS
QIHTSANIKL RAKLSNVTKG IK
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