Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2593 |
Symbol | |
ID | 2741297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 2627887 |
End bp | 2629023 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637161489 |
Product | sigma-54-binding protein |
Protein accession | NP_973191 |
Protein GI | 42528093 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.350153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATT GCGTTTACTC GGCATATTCA AAAGAAGATG CTAAGCATTT TATTAAAGAA GTCGGGAGTT TGTGGAATGT ATCTTTAACC TTTGACAGCA GCAAAATAGT AGATATTTTA AAAGAGAAAC ATTTTGATTT TGTAATTATC GATGCAGAAT CAGGCGGCCT TTTTCTACCC GATACCCTTG AATTAATCAA AAACGAATTT CCACATATTC ATATATTTAT TATAATACAT TGTAAACAAA ATGATTTACA ATACAATCTA TTAAATTCCC ATGTATCGGA AGTTTTTGAA ATTCCAAAAG ATTTTAAGGG GATATACGAC AAAATAGAAA ATTTCTTTCC GGAAGAACTG TGCAAAGAAA AAACACCGGC CTACACAAAA GAAGACGAAA ATATACAAAT AATAAAAAAA GAAATAATCG GCATCAGTAA GGAAATCTGC GAGCTTAGGG AATTTATCTA CAGAGCAGCC AACTCAAACC TGCCGGTGCT CCTATCCGGA GAAACAGGAG TAGGAAAAGG GGTGACAGCA AATTTAATAC ATAGGCTATC TCAGGTCAAA AACAAAAAAT TCCTGCCGAT AAACGTCAGC TGCATACCGG AATCATTGGC AGAATCTTTT TTGTTCGGCA CTGAAGAAGG AAGCTTTACC GGCGCAGTTA AAAAAGAAGG AGCTTTTTTT GAAGCCTCCG GCGGCACAAT CTTTTTAGAC GAAATGGAAA CCCTTTCACC GGATATCCAG GCAAAACTTC TGCATGTCTT GGAATCAGGT CTTATAAGAC CCGTCGGCTC GACAAAATCA AAGCAGGTTG AATTCCGTTT AATAGCAGCG GCAAACGAAG ATTTACAAAA AATGATTGAC GAAAAAAAAT TCCGCCAAGA CCTCTACTAT AGACTTCATG TTCTGCACCA TGAAATACCG CCTCTGCGGA ACAGAAAAGA AGACATAAAA TACATCGCTC AAGCCTATCT TACCAAGGCA GAAAAAACTA TAAGCGACAG GGCACAAGCA AAACTTAATT TTCACAACTG GCCCGGAAAC ATAAGAGAAT TATACAACTG TCTGGACAGG GCCTGTAATC TTGCCGGAGA CGGAGAAAAA ATAGAAAACC GCCATATAAA ATTCTAG
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Protein sequence | MKDCVYSAYS KEDAKHFIKE VGSLWNVSLT FDSSKIVDIL KEKHFDFVII DAESGGLFLP DTLELIKNEF PHIHIFIIIH CKQNDLQYNL LNSHVSEVFE IPKDFKGIYD KIENFFPEEL CKEKTPAYTK EDENIQIIKK EIIGISKEIC ELREFIYRAA NSNLPVLLSG ETGVGKGVTA NLIHRLSQVK NKKFLPINVS CIPESLAESF LFGTEEGSFT GAVKKEGAFF EASGGTIFLD EMETLSPDIQ AKLLHVLESG LIRPVGSTKS KQVEFRLIAA ANEDLQKMID EKKFRQDLYY RLHVLHHEIP PLRNRKEDIK YIAQAYLTKA EKTISDRAQA KLNFHNWPGN IRELYNCLDR ACNLAGDGEK IENRHIKF
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