Gene TDE2575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2575 
Symbol 
ID2741279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp2601158 
End bp2601772 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content39% 
IMG OID637161468 
Producthypothetical protein 
Protein accessionNP_973173 
Protein GI42528075 
COG category[S] Function unknown 
COG ID[COG3758] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00880643 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA CACATTATAG AGAAAAAGAT TTTAAAACTT CAAACTGGAG CGGAGGCACC 
ACAACGGAGC TTTTTATTTA TCCGCGTGAA GCCGATTACA AAAAAAGGGA TTTTTTATTC 
CGATTAAGCT CCGCTACCGT CGATTTGGAT AGATCAGACT TTACCCCTCT TCCGGGATTT 
TTCCGTTTTA TTTCTCCCTT AAATGGGGAC TTAAAAATAA GCCATGACGA AAAAAACTTT 
ACCAAACTTA AGCCCTACGA AGTCTATGCC TTTGACGGCG GAGCAAAAAC GGTCAGCATG 
GGAAGGGTAA GGGATTTTAA CCTCATGGTA AAAGACGGTG TAGAAACGGA AGTAAAAAAT 
TTTGCCCTAA ACAAAAATTC GGTTTTAAAG TTTTCGGTAT CGAAGGGAGA AATCGGCTGG 
ATTTTTTTGT ACAATACCAA AGCCTTGCTT AGTGCCGAAA CAGTCAACGA AAAAAAAGAT 
TTTAATCTTG ATAAATTGGA CTTGATTATT TTTGAGGCAG GTGATGACAC AAACGGCGAT 
ACAAAAGAAG AAGTTTTAAT TTCGGCCGAT GGAGCCTTGA GCCTTTTTTA CGGAAAGGTA 
CCGACAGCTT TCTAA
 
Protein sequence
MKITHYREKD FKTSNWSGGT TTELFIYPRE ADYKKRDFLF RLSSATVDLD RSDFTPLPGF 
FRFISPLNGD LKISHDEKNF TKLKPYEVYA FDGGAKTVSM GRVRDFNLMV KDGVETEVKN 
FALNKNSVLK FSVSKGEIGW IFLYNTKALL SAETVNEKKD FNLDKLDLII FEAGDDTNGD 
TKEEVLISAD GALSLFYGKV PTAF