Gene TDE2568 details

Gene Information

• Locus tag: TDE2568
• Symbol: thiI
• ID: 2739933
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 2595282
• End bp: 2596445
• Gene Length: 1164 bp
• Protein Length: 387 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637161461
• Product: thiamine biosynthesis protein ThiI
• Protein accession: NP_973166
• Protein GI: 42528068
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0301] Thiamine biosynthesis ATP pyrophosphatase
• TIGRFAM ID: [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGAAC TTTTCTATCT TGCAAAAATA GGCGAAATTA ACCTAAAAAA AGGTAATTTA 
AAAGACTTTG AAATGCGGCT TTCGCAGAAT TTACGCAGCT ATTTACCGGA GGCTAAACCC 
AATATACGCG TGAGAGCCGG AAGAATGTAT GTAAGCATCA AGCCCGAATT TAAAGAAAAA 
ACCGAAGAAG CCCTAAATAA ACTCATAGGC ATTACAGGCT GGGCACAGGC CCTTCCTGCC 
GAAAAAACTA TTGAAGCCAT TACCGAAACA GCCAGAGCTG AGGCTATAAG GGCCCGGGAT 
GCGGGGGCTA AGACCTTTAA AATAGAATCC CGCCGAGGAG AAAAAAACTT CCCTCTAACC 
TCCTACGAAA TTTCACGGGA AGTCGGAGGG GTAATTCATA CTGAAGGGAT TTTAAAAGTA 
GATGTTCATA ATCCCGACAT CGTAATTTCT ATCGAAGTAA GAGAAAAAGC TTTTATCTAC 
GGCCTTGAAC ACAAGGGACG GCGGGGTCTT CCCTGCGGCT GTTCGGGAAG GGGACTTTTG 
CTCCTATCGG GAGGAATAGA CTCCCCCGTT GCAGGCTTTA AAATGCTCAC CCGCGGAATG 
AAGCTGGACT ATATCTATTT TCACTCCCAT CCTTATACCT CGCCCGAAGC CCAGGCTAAG 
GTTGAAAAAC TGGCCGACAT TTTAGCGGGC TACGGCCTCG GCGGATATCT CAATATAATT 
CCCTTTACAA AGGTGCAGCA CCAAATCAGA GAAAAAAGCC CCGAGGCCTA TCTAACTTTA 
ATGATGAGAA TCTGCATGAT GAAAATAGCA AATATGACGG CAAGGGGTAT AAATTCCAAA 
TGCCTTATCA CGGGAGAAAG CCTTGCTCAG GTTGCAAGCC AAACGGTAGA AAACTTGACT 
GTAACAAACT CTTATGCGGA ATTTCCTGTT TTTAGGCCCC TCATCGGCCT CGATAAGGAA 
GAAATTACTA TAGAAGCCAA GGAAATAGGC ACCTATGAAA CCTCAATCTT GCCGTACGAA 
GATTGCTGTG TAATGTTTTC ACCCAAGCAC CCTATTTTAC ACTCAAACCT CAAAGATGCG 
GCCGAAATTT TCGAAAGAAT GGAAATAGAC AGCCTTTTAG AAGAGGCATA CTCACAAAGA 
GAAGTAAAAA AGATGAGTTT TTAA 

 

Protein sequence

MEELFYLAKI GEINLKKGNL KDFEMRLSQN LRSYLPEAKP NIRVRAGRMY VSIKPEFKEK 
TEEALNKLIG ITGWAQALPA EKTIEAITET ARAEAIRARD AGAKTFKIES RRGEKNFPLT 
SYEISREVGG VIHTEGILKV DVHNPDIVIS IEVREKAFIY GLEHKGRRGL PCGCSGRGLL 
LLSGGIDSPV AGFKMLTRGM KLDYIYFHSH PYTSPEAQAK VEKLADILAG YGLGGYLNII 
PFTKVQHQIR EKSPEAYLTL MMRICMMKIA NMTARGINSK CLITGESLAQ VASQTVENLT 
VTNSYAEFPV FRPLIGLDKE EITIEAKEIG TYETSILPYE DCCVMFSPKH PILHSNLKDA 
AEIFERMEID SLLEEAYSQR EVKKMSF