Gene TDE2559 details

Gene Information

• Locus tag: TDE2559
• ID: 2739924
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 2585474
• End bp: 2587294
• Gene Length: 1821 bp
• Protein Length: 606 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637161452
• Product: ABC transporter, ATP-binding/permease protein
• Protein accession: NP_973157
• Protein GI: 42528059
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCATA AACGCCTGAC AGGGTCGGTG CCGAAAAGTA AAAAATGGAT ATTGCTTTCG 
GCTCTTTCTT CATGGATTTC TCTATTGTGC AATACGGCTA TTACCTTTGT AACTGTGCGC 
TTTATTTTCG GCCTATATAA TTCTTCGCTT GATAAAAAAA TGGTTTTTGT GTTGTTATTC 
GCAGCTTCGG CTGCCTTGAT AATAAGAGTT ATTGCCGTCC GTAAACGCTC TTACTTTTCG 
TATAGGGCAG GAACCGAGGT TAAAAGAACA TTGCGCTCGA TGCTCTACGA TAAATTTATT 
TCGTTAAAGC TTAATTATTC TCAATATATA AGCATGGCCG AGGTTACTCA AATAGGTACT 
GACGGAATCG AGCAGCTTGA TTCTTATTTT GGGGCTTATC TGCCTCAGTT TTTTTTCAGT 
ATGGCAGCTC CGGTAACTCT TTTTATAATT CTTGCACCGA TAAACTTTTT TGCCGCCCTT 
GTGCTTTTTG TCTGCGTGCC CTTAATTCCC CTTTCGATTG CAGCCATTCA AACGGTTGCA 
AAGCGTATTT TAAAAAGATA CCTTGATGTT TATACGGGGC TCGGAGATTC CTTTTTGGAT 
AACCTCCGCG GCCTTATCCC CTTGAAAGCC TATTCCGACG ATGAGGCTCA GCATAGGGAA 
CTAAATGCCG AGGCGGAAAA TTTTAGGCGG ATAACGATGA GGGTTTTAAC CATGCAGCTT 
AATTCTATCT TTGTGATGGA TACCGTTGCA TACGGCGGGA CTGCCCTCGG AACAATCGTC 
AGCCTTTATC AGTTAAGAGT CGGAAATCTT TCGATAGAAG GAGATCTTCT TTTTATTTTG 
CTTTGTGCCG AATTCTTTTT ACCTCTGCGT GCACTGGGCT CGTTCTTTCA TATAGCGATG 
AACGGCATAA CCGCAGCGAA CCGCCTCTTT GAATTGATGG ATGTAAAAAG CGATTCGGCT 
TCAATTTTAA GCGAAGCCGA ACTTGAAGAA ACTGCAAAAA AAATTAAAAG AGCTCAGTTC 
GGCAGTCAGC CGGATTCTCT ACAGGGCAAT TTGCCTTCGC TCGAAGTAAA AAATTTAAAC 
TTTAATTATA ACGAATCAAA GCAGGCTCTA AAAAATATCT CTCTTGAATT TTTAAAACCG 
GGCTTTTACG GCATCGCAGG AGAAAGCGGT TCGGGCAAAT CCACTGCGGC CGCCTTACTT 
ATGGGCTTAC AAAAAAACTA TTCCGGCGAA ATCCTCTTAT CGGGCATAGA AGCAAAAAAA 
CTTCCCGACG AATTTAGAGC TAGGTATATG AATCTTGTCT CTACCGAAAG CTTTTTGTTC 
GGAGCTTCGG TGAGGGAAAA CCTTTTAATA GCGAAGCCTT CTGCAAGCGA TGAAGAATTG 
ATGAGCGTAT TAAAAGAAGT TCTCTTAGAC GAGTTTATTT TAAACAGAAA CTCTTCGGGA 
GACGGTAATT CGGGTTTGGA TTTTTATATT GAATCGGGCG GAAAGAATTT ATCGGGCGGA 
CAGGTTCAGC GTTTTGCTCT TGCGCGGGCT CTCCTCCATG ATGCGGACAT TTATATTTTT 
GATGAGGCTG TAAGCAATAT CGATGTCGAA AGCGAAGAGC TTATTTTAAG CACTCTTTAT 
GAATTAAGCA AAACCAAAAT AATTATCTTT ATTTCACACA GGCTTGCGAA TATTGAAAAT 
GCAGATCACA TCTATGTATT TGAAAAGGGT GAAATAAAAG AAGAAGGAAC TCATTCAAGC 
CTCATTGAAA AAAACGGTAT CTATGCAAGG ATGTATTTGC AGCAAAAAGA TCTTGAAAAA 
ATACGGATGG ATGTAAAATG A 

 

Protein sequence

MIHKRLTGSV PKSKKWILLS ALSSWISLLC NTAITFVTVR FIFGLYNSSL DKKMVFVLLF 
AASAALIIRV IAVRKRSYFS YRAGTEVKRT LRSMLYDKFI SLKLNYSQYI SMAEVTQIGT 
DGIEQLDSYF GAYLPQFFFS MAAPVTLFII LAPINFFAAL VLFVCVPLIP LSIAAIQTVA 
KRILKRYLDV YTGLGDSFLD NLRGLIPLKA YSDDEAQHRE LNAEAENFRR ITMRVLTMQL 
NSIFVMDTVA YGGTALGTIV SLYQLRVGNL SIEGDLLFIL LCAEFFLPLR ALGSFFHIAM 
NGITAANRLF ELMDVKSDSA SILSEAELEE TAKKIKRAQF GSQPDSLQGN LPSLEVKNLN 
FNYNESKQAL KNISLEFLKP GFYGIAGESG SGKSTAAALL MGLQKNYSGE ILLSGIEAKK 
LPDEFRARYM NLVSTESFLF GASVRENLLI AKPSASDEEL MSVLKEVLLD EFILNRNSSG 
DGNSGLDFYI ESGGKNLSGG QVQRFALARA LLHDADIYIF DEAVSNIDVE SEELILSTLY 
ELSKTKIIIF ISHRLANIEN ADHIYVFEKG EIKEEGTHSS LIEKNGIYAR MYLQQKDLEK 
IRMDVK