Gene TDE2532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2532 
Symbol 
ID2739044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2558586 
End bp2559017 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content28% 
IMG OID637161425 
ProductPilT domain-containing protein 
Protein accessionNP_973130 
Protein GI42528032 
COG category[R] General function prediction only 
COG ID[COG5573] Predicted nucleic-acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.127016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATA TCGTGAATAA AATATTTATT GATACAAATA TACTTGTTTA TGCACTTGAC 
AATCGAGACA ATGATAAAAT GAATAAAGCA CGCAATATAT TAAGAAAGGT AATTTATGAA
AACAAGCCGG TAATATCCAC ACAAGTAATA AATGAATTCT ATGTTGCCGC CACTAAAAAA
TTAAACATAG ACAAAACTCT TATAAAAACC ATAGTTCACA ATTTTAAAAA TATGGAAATT
ATAACAAGTG ATTTACAATT GACAGAAAAT GCTATAAACA TAAGTATAGA GTCACAGATA
TCCTTTTGGG ATTCACTAAT TATTGCTGCT GCTGAAAAAG CTAATTGTAA ATTGATTATA
TCCGAAGATT TAAATTCAGG GCAAACATAT CAAGGGATAT CCCTTATAAA CCCATTTCAA
CAGGAAATAT AG
 
Protein sequence
MSYIVNKIFI DTNILVYALD NRDNDKMNKA RNILRKVIYE NKPVISTQVI NEFYVAATKK 
LNIDKTLIKT IVHNFKNMEI ITSDLQLTEN AINISIESQI SFWDSLIIAA AEKANCKLII
SEDLNSGQTY QGISLINPFQ QEI