Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2519 |
Symbol | |
ID | 2739031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2544929 |
End bp | 2546539 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637161411 |
Product | hypothetical protein |
Protein accession | NP_973117 |
Protein GI | 42528019 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.064886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACAA TTAGAAAAAT GCCCATAGGC GTTCAAAGTT TTGAAGATTT ACGTTCAAAA GGTTTTATCT ATATTGATAA AACGGAATTC ATATGGCAAT TGGTTGACAG CAGTAAGGTT CACTTTTTAA GCCGTCCGCG CCGCTTTGGG AAAAGCCTTT TGCTTTCCAC TCTAAAAGCC TACTTCCTTG GGCAGAAAGA ACTCTTCAAA GGTTTAGCGA TTGAGAAATT TGAAGAAGCC GAAAAAGGAA AACGTGAAAT CTGGCAAGAG TATCCGGTCT TCTATTTGGA TTTTAATGCC GAAAGTTATA TGGATATAAA GAGCCTTGAA ACCGTTTTAA ATACTCATCT TTCTTTATGG GAAAAAGAAT ATGGAAAGGA AGCTGCAGAG ACCACTTTTG CAAGCCGTTT TGCAGGCCTT ATCCGCCGCT CTTATGAAAA AACCGGCAGG CAGGCTGTTG TTCTTATCGA TGAATATGAT AAACCTCTTC TTCAAACAAT GTGGAAGGAT GAAGTTTTAA ACGAAACCTA CCGTACAATC CTTAAAGGCT TTTTCGGGGT TATAAAAAGT GCAGACCAAT ACCTCCGCTT TGCATTTTTA ACCGGAGTTA CAAAATTCAG TAAGGTGAGC ATATTCAGCG ATTTAAACAA CCTTAGGGAT TTAAGTCTAT TGTCCGATTA CTCAGGAATC TGCGGTATTT CGCAAGAAGA GCTTGAAGCC GATTTTAAGC CTGAGATTGC AGCCCTTGCC GAAAAAAATA GCTTGACTTA TGATGAAGCT CTTGCAAAGT TAAAACAAAA ATATGACGGC TACCTTTTTG CAAGAAAGGG AAGGGCAATG TATAATCCTT TTAGCCTTTT AAATGTTTTT GCATCAAAAG AGTTTTCAAG CTATTGGTTT GCAACAGGTA CGCCTACATT TTTGGTAGAA TACTTAAAAA AGGCTTATTA TAATATTCCC GACCTTGACG GAAATATTCA GCTTGATGAG CAAGGTCTTA ATGAGTACAG GGCTGATCCG ATTCTCCCTC TGCCAATATT GTTTCAATCC GGATATTTGA CGATTAAAGA CTATAATGAC TTTGCGGGAC TTTACCGTTT GGGATTCCCT AACGATGAGG TGCGCTACGG TTTTTTACAT AACCTCATGC CTGCCTACAC TTCGATAAGA TCCGACAAAA CGGGACTTTC AATTTGGGAA TTTTACGAGC AAATTGAGGC AGGAGATGTA GACGGTTTTA TGCAAAAGAT GAAGGGAATA ATTTCTGGAA TACCCTACGA CACCTTAACT GAAAAAGATT TATCCTTACG GGAACAAAAT TATCAGACAG CGGTTTATCT TGTGTTTGCA TTGATGAACC AGTTTGTGCA TACTGAAGTT CATTGTGCAA CAGGCAGGGC TGATTGTGTT GTTGAATTTA AAGATAAGGT TTATATTTTT GAGTTTAAGC TTACCTCAAA CGAAACGGCG GAGAATGCCG TAAAACAAAT CAAAGAGAAA AATTATGCAG ACAGTTACTC AGGCAGCGGT AAAAAAATTA TAGCAATCGG TTCTAGTTTT GACGAAGAAA AAAGGACTAT CAAAGATTGG ATGACCTCGG CTATAGTTTA A
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Protein sequence | MSTIRKMPIG VQSFEDLRSK GFIYIDKTEF IWQLVDSSKV HFLSRPRRFG KSLLLSTLKA YFLGQKELFK GLAIEKFEEA EKGKREIWQE YPVFYLDFNA ESYMDIKSLE TVLNTHLSLW EKEYGKEAAE TTFASRFAGL IRRSYEKTGR QAVVLIDEYD KPLLQTMWKD EVLNETYRTI LKGFFGVIKS ADQYLRFAFL TGVTKFSKVS IFSDLNNLRD LSLLSDYSGI CGISQEELEA DFKPEIAALA EKNSLTYDEA LAKLKQKYDG YLFARKGRAM YNPFSLLNVF ASKEFSSYWF ATGTPTFLVE YLKKAYYNIP DLDGNIQLDE QGLNEYRADP ILPLPILFQS GYLTIKDYND FAGLYRLGFP NDEVRYGFLH NLMPAYTSIR SDKTGLSIWE FYEQIEAGDV DGFMQKMKGI ISGIPYDTLT EKDLSLREQN YQTAVYLVFA LMNQFVHTEV HCATGRADCV VEFKDKVYIF EFKLTSNETA ENAVKQIKEK NYADSYSGSG KKIIAIGSSF DEEKRTIKDW MTSAIV
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