Gene TDE2504 details

Gene Information

• Locus tag: TDE2504
• Symbol: gcp
• ID: 2741477
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 2529141
• End bp: 2530157
• Gene Length: 1017 bp
• Protein Length: 338 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637161396
• Product: putative DNA-binding/iron metalloprotein/AP endonuclease
• Protein accession: NP_973102
• Protein GI: 42528004
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0533] Metal-dependent proteases with possible chaperone activity
• TIGRFAM ID: [TIGR00329] metallohydrolase, glycoprotease/Kae1 family

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.121796
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATAT TAGGAATAGA AAGTTCTTGC GATGAAACTG CGGCGGCAGT CGTCGAGGAC 
GGAAATAAAA TTTTAAGCAA TATTGTTGCA ACACAAATTC CGTTCCACAA AATGTATAAC 
GGCGTCGTTC CCGAAATAGC AAGCCGAAAA CATACCGAAT GGATTTTGCC CGTTGTTAAA 
CAAGCCTTGG CTGAAGCCGG TCTGAGCCTT AAAGAAATAG ACGGCATCGC TGCCACCGGA 
AGGCCGGGAC TCATGGGTTC CCTTTTAGTG GGGCTTACCT TTGCAAAAAC TCTTGCATGG 
TCTTCAAATA AACCCTTTAT TGCCGTAAAT CACATGCTGG GACATCTATA TGCAAGCCAT 
CTGGAAAATG ATATCCCCTA CCCATATCTG GGGCTTTTAG TTTCAGGCGG GCACTCGATT 
ATCTGCAAGG TAAATAATTT TGACGACATC GAAGTCCTCG GCACCACAAT AGATGATGCT 
CCGGGGGAAG CCTTTGACAA GGTTGCCAAG TTTTATAATC TGGGATACCC GGGAGGAGCC 
GTAATCGACA AACTCGCCAA AAGCGGAAAT CCCAAGGCGG CTAACTTCCC CATGCCTATA 
ATCCACAAGG AAGGGCATAA GTACGATGTT TCCTATTCGG GATTAAAAAC CGCCGTCATA 
AATCAGATAG ACCAATTTTG GAATAAGGAC TTTGAAAAAA CACCCGAGAA CATTGCAGCC 
GCATTCCAAA CAAGGGCGGT AAAAATTTTG CTCAGGCCTC TTTTGGATGC TTCGATAGAT 
ACGGGCTTAA AAACGATAGT AGCAGGCGGA GGAGTTGCGG CCAATTCTCT GTTGAGGGAA 
AAACTTGCCG AGCACAAGGA ATTAAAGTGC ATATTTCCCT CGCTTAAATT CTGTACGGAT 
AATGCGGCGA TGATTGCAGG CCTCGGTTAT CATTACCTAA AACGCGGAGA CAGAACGCCC 
TTTACCGTCG AAGCCTCCGC CCGAGTTGAA GGCTTCAGCA AAAAAGGCAG GCAATAG 

 

Protein sequence

MKILGIESSC DETAAAVVED GNKILSNIVA TQIPFHKMYN GVVPEIASRK HTEWILPVVK 
QALAEAGLSL KEIDGIAATG RPGLMGSLLV GLTFAKTLAW SSNKPFIAVN HMLGHLYASH 
LENDIPYPYL GLLVSGGHSI ICKVNNFDDI EVLGTTIDDA PGEAFDKVAK FYNLGYPGGA 
VIDKLAKSGN PKAANFPMPI IHKEGHKYDV SYSGLKTAVI NQIDQFWNKD FEKTPENIAA 
AFQTRAVKIL LRPLLDASID TGLKTIVAGG GVAANSLLRE KLAEHKELKC IFPSLKFCTD 
NAAMIAGLGY HYLKRGDRTP FTVEASARVE GFSKKGRQ