| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2493 |
|---|
| Symbol | |
|---|
| ID | 2741466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 2516835 |
|---|
| End bp | 2518454 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637161385 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_973091 |
|---|
| Protein GI | 42527993 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTATGTTA AATCGCGGTC TGATTTACCG CCGCTCGGAC CTATACAAAA CGGAACGAAT
AAGGTCAAAA TCACTTTTGC GGTACACCCT GCCGAAGCGG GGAAGATACT GGGGCCTAAC
CCTATCAGCG TAAATAGAAA TACGACGTGG AATCAGCTTG AAGCCTACGC CAAAGCCGCA
CTCAAGGCGA ACTACGGCTT TAGCGAAGAA CATGTCGAAT GGAAAAAGGA CGACAGCGTG
TTGGGTAATA CCGACAACTT CAACACCGAT GTAACGCTCA CCGCATATCC GGAAGACCTG
CGCATTTTCG TAACGCTTAC CGGTGACAGC CGCATTACGA TTGCAGAGCC TGCAACCATT
ACCGTTATCG ACGGGGCAAA GTGGAAGGAC ATCAAAACCA AGGCGGCCGC CAAGGTAACG
GTGAAAAACG CCAACTACGC CATAACCGCA TGGAAACTTG ATGGTGAAAG CGGCACAGTG
TTGACTGACG ATTATGAGTT CAAAAAAAAC CAAGGGACAT CCCGCACAGT CTATGCCAAA
ACGGGCGACA GGCGCATAAC GCTTACCGTC AAGTACGGCA GGGGTTTTGA CGCTACGAAG
AACGGCGGCA CCATCACCGT ATACGACGGT GATACGTGGC GCAGTGTAAA AGCGGAGGCG
GCAAAAAAGC TAAACATACC GAAAGGCATT ATCTTACAGG AATGGCGGCG TAACGACGCA
AGCGGTGAAA TTATAAAGGA CGGTTATATC TTTAGAGCAA GCGACGGTAA TACACACACT
TTCTTTGCAC GTATCAGAGC GGACATAAAA CTTAAAGATA ATAAACTGAC TTATTACGCC
ATGGTAAACG GCGATGTTAC CGAATACGAC TACTGGCTGT GCGGTATTCC GGAGGCAAAA
GGCGGTTTGA TTGGCAGAGA TGATAACCTC AGCAACAAGG AGCGTCCGAT CTATTTGTCG
GCCTATCGGA TGGGCAAAAC CGAAGTACCT CAGGTTCTGT ACGAACTGGT AATGGGAAAA
AATCCGAGCT ACCATCAGGG CGGCTCACAT CTGCCGGCTG AAGGCGAAAG GCAAGAGCTG
CGTCCGGTAG AAAAGGTAAG CTGGCTTGAC TGTATTGCTT TTTGCAATGA ATTGACGCGC
TGTACGGAAG GTTTGGGAGA AGGACAATGC GTGTATACCT ACAACAATAA ACCCTACACC
GTACAGGATG CAGAGGACAA ACGTACACCC TATATATCAC CTTGGGCGCG CAAAGGATTT
TGCCTGCCCA CCGACGAGGA ATGGGAGTGG GCAGCTCAAG GGGATAGTCG GAGGCAGAAG
TATTCGGGTA CGAATGATGT AAATGGCCTT AACAGTTATG CGTGGTACAG AGAAAACAGC
GAACACAAAA CCCACGAAGT ACAAACGAAA ACCTCGAACG ACGACGGCTT ACACGACATG
AGCGGCAACG TCGCCGAATG GTGCTGGAAT CGGTATGAAT ATTCTGAATC CAAGCGTATC
ATTCGAGGCG GTTGTTTTGC AGACTCCGAG TCTTTATGTA CTTGTGACGC ACGAGACCAC
ATGCGTGACT ACGACACAAG AGATATCTTT TACGGTCTTC GCATAGTGTT TCATCCTTGA
|
|---|
| Protein sequence | MYVKSRSDLP PLGPIQNGTN KVKITFAVHP AEAGKILGPN PISVNRNTTW NQLEAYAKAA
LKANYGFSEE HVEWKKDDSV LGNTDNFNTD VTLTAYPEDL RIFVTLTGDS RITIAEPATI
TVIDGAKWKD IKTKAAAKVT VKNANYAITA WKLDGESGTV LTDDYEFKKN QGTSRTVYAK
TGDRRITLTV KYGRGFDATK NGGTITVYDG DTWRSVKAEA AKKLNIPKGI ILQEWRRNDA
SGEIIKDGYI FRASDGNTHT FFARIRADIK LKDNKLTYYA MVNGDVTEYD YWLCGIPEAK
GGLIGRDDNL SNKERPIYLS AYRMGKTEVP QVLYELVMGK NPSYHQGGSH LPAEGERQEL
RPVEKVSWLD CIAFCNELTR CTEGLGEGQC VYTYNNKPYT VQDAEDKRTP YISPWARKGF
CLPTDEEWEW AAQGDSRRQK YSGTNDVNGL NSYAWYRENS EHKTHEVQTK TSNDDGLHDM
SGNVAEWCWN RYEYSESKRI IRGGCFADSE SLCTCDARDH MRDYDTRDIF YGLRIVFHP
|
|---|
| |